TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTAAGATCTCATGGCCTTGGGCTTTTTTTTTGGTTGGGAGACTT
TTAATGACTGCTTCTATTTCCTTAGGGGTTATGGGACTGTTTAGAAGTTT
ATATGATCCTGATTTAACTTTGGTACCTGGTATCTGTCTAGAACGTCATC
GGCTTCATCTAGATTTTCCAGTTTTGTAGAGTATAGGCTTTTGTATTAGG
ACCTGATGGATTTTTAAAATTTCCTCAGTTTCTGTTTTGTTTATTTGTTT
GTTTCGTTTTGTTTTGTTTTTGATACAGGGTTTCTCTGTATAGCCCTGGC
TATCCTGGAACTCACTTTGTAGACCAGGCTAGCCTCGAACTCAGAAATCC
ACCTGCCTCTGCCTCCCACCACCTGGGATTAAAGGCATGTACCACCACCA
CCCAGCATCAGTTTCTGTTGTTATATCTCCCTTTTCATTTCTGATTTTGT
TAATTTGGATACTGTCTCTGTGTCCTTTAATTAGTTTGGCTAACGGTTTA
TCTATCTTGTTGATTTTCTCAAAGAACCAGCTTCTGGTTTAGTTGATTCT
TTGTGTAGCTCTCTTTGTTTCTACTTGGCTGATTTCATCTCTGAGTTTGA
TTATTTTCTGCTATCTACTCCTCTTGGCCCTGTGATGTCAATTTGCTTTC
TTTCTCTTCCTTCCTTCTTTCCTTTG

CGATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATGTGAAGAAAAAAATTACACTA
AAATAAAGAGAACAGCTTTATATCTAGCAGATTAATTTACATTGAGAATG
CAAAAGGAGAATATAAGTACACTCTAAAGAATGTAACCCAGTGTAAACAC
ACAGGCGATTAGAGTAGATTAAAATAAAAAGCCGGTTGATTCTTGTGAAG
AAATCAGAAGGGGAATAAACTAGGAAGAAAGTTAAAACATGGGTGGACTT
AGTGTACATACTAGGTCTGCCTATTGAAAGAAGTGAGTCCACCATTCTTT
CACCGTGTGAAGCCCTGGTCTTCACAAAGGGACTAGGGGATTTTAGGTGA
AAATGAAAATGGGGAGAGGAACCAGGATGGTTTTACTTTTAGTGCCCTTG
AGCCTTAAAAAGGCAGCTGAAACAGCCTGGAGCTCAGTCTGTGTCCAGCA
CTGAAGGAAGCCATTTCCCCTATTCCCTGCCGTGTGCTTTCTCAGGCCTC
TGTTAGTACAGAGTTTCTTTTCTCCGCTTAACAATTTTTTAAATTACTGA
GTAAACTTAAGATTGTTACACTTACTACAACATTCAGATTTCTGTTTTTA
GTTTTAAAAAATAAGGTGCTTTTTAAGTCGGGAGCATACATCCATGATAA
AAATGTTTAAACAAGACATCAGAAGAATGGTC

Query= MSMg01no322_c09.g1 MSMg01no322_c09.g1 CHROMAT_FILE:
MSMg01no322_c09.g1 PHD_FILE: MSMg01no322_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:03 2005
         (656 letters)



>mm_chr5_30337447_30338502
          Length = 1056

 Score = 1193 bits (617), Expect = 0.0
 Identities = 647/659 (98%), Gaps = 6/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgtgaagaaaaaaattacactaaaataaagagaacagctttatatctagcagattaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 aatgtgaagaaaaaaattacactaaaataaagagaacagctttatatctagcagattaat 797

                                                                       
Query: 61  ttacattgagaatgcaaaaggagaatataagtacactctaaagaatgtaacccagtgtaa 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttatattgagaatgcaaaaggagaatataagtacactctaaagaatgtaacccagtgtaa 737

                                                                       
Query: 121 acacacaggcgattagagtagattaaaataaaaagccggttgattcttgtgaagaaatca 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 736 acacacaggcgattagagtagattaaaatgaaaagccggttgattcttgtgaagaaatca 677

                                                                       
Query: 181 gaaggggaataaactaggaagaaagttaaaacatgggtggacttagtgtacatactaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaaggggaataaactaggaagaaagttaaaacatgggtggacttagtgtacatactaggt 617

                                                                       
Query: 241 ctgcctattgaaagaagtgagtccaccattctttcaccgtgtgaagccctggtcttcaca 300
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cagcctattgaaagaagtgagtccaccattctttcaccgtgtgaagccctggtcttcaca 557

                                                                       
Query: 301 aagggactaggggattttaggtgaaaatgaaaatggggagaggaaccaggatggttttac 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 556 aagggactaggggattttaggtgaaaatgaaaatggggagaggaagcaggatggttttac 497

                                                                       
Query: 361 ttttagtgcccttgagccttaaaaaggcagctgaaacagcctggagctcagtctgtgtcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttttagtgcccttgagccttaaaaaggcagctgaaacagcctggagctcagtctgtgtcc 437

                                                                       
Query: 421 agcactgaaggaagccatttcccctattccctgccgtgtgctttctcaggcctctgttag 480
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agcaatgaaggaagccatttcccctattccctgccgtgtgctttctcaggcctctgttag 377

                                                                       
Query: 481 tacagagtttcttttctccgcttaacaatttttt-aaattactgagtaaacttaagattg 539
           |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 376 tacagagtttcttttctccgcttaacaatttttttaaattactgaataaacttaagattg 317

                                                                       
Query: 540 ttacacttactacaacattcagatttctgtttttagtttt--aaaaaataaggtgctttt 597
           ||||||||||||||||||||||||||||||||||||||||  ||||||   |||||||||
Sbjct: 316 ttacacttactacaacattcagatttctgtttttagttttttaaaaaa---ggtgctttt 260

                                                                      
Query: 598 taagtcgggagcatacatccatgataaaaatgtttaaacaagacatcagaagaatggtc 656
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 taagtcgggagcatacatccatgataaaaatgtttaaacaagacatcagaagaatggtc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)