Query= MSMg01no323_o11.b1 MSMg01no323_o11.b1 CHROMAT_FILE:
MSMg01no323_o11.b1 PHD_FILE: MSMg01no323_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:59 2005
(654 letters)
>mm_chr5_136897708_136898761
Length = 1054
Score = 1218 bits (630), Expect = 0.0
Identities = 650/660 (98%), Gaps = 6/660 (0%)
Strand = Plus / Plus
Query: 1 ctcttgaatattcggcctggcgtctgtgcagtcactcagtagaaggcttcagtctgctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctcttgaatattcggcctggcgtctgtgcagtcactcagtagaaggcttcagtctgctgt 254
Query: 61 ccagagccgcctgactggctggatgagtcatacagaagttcatagatctcaaaagcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccagagccgcctgactggctggatgagtcatacagaagttcatagatctcaaaagcagct 314
Query: 121 gctcagacttttctgttattaccatatacagctaatatagatccatttatctccagccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gctcagacttttctgttattaccatatacagctaatatagatccatttatctccagccat 374
Query: 181 tgttgaatggagttttagcaattccatacctatcatctctcttgagaatttctccatcta 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgttgaatggagttttagcaactccatacctatcatctctcttgagaatttctccatcta 434
Query: 241 caactctggcaaaaagactatacacccaatcagccacaggacctaaaaccatcaccctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caactctggcaaaaagactatacacccaatcagccacaggacctaaaaccatcaccctgg 494
Query: 301 actacaaaatgtttgcatggctaagtatttgaatgaggtcaaagtacaggctaactttac 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 495 actacaaaatgtttgcatggctaagtatttgaataaggtcaaagtacaggctaactttac 554
Query: 361 attccgacaacatcaaaagagaactgcacaggacaataaggattccaaaacaatttcacc 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 attccaacaacatcaaaagagaactgcacaggacaataaggattccaaaacaatttcacc 614
Query: 421 tgagtagtgcttcccccacccc------tgcattttgtactacatactcgggaatggtct 474
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 615 tgagtagtgcttcccccacccccacccctgcattttgtactacatactcgggaatggtct 674
Query: 475 gaaaaaattgtggtaggttggaattgattttgacatagtccctataagtgatgaaaatat 534
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 675 gaaaaaattgtggtaggttggaattgattttgacatagtccctgtaagtgatgaaaatat 734
Query: 535 tgtaaagttctgacaagctggcagaattatctgggaaagggctaagctgacagagtgctt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tgtaaagttctgacaagctggcagaattatctgggaaagggctaagctgacagagtgctt 794
Query: 595 ccctagcatgatgatgccctgtgttcacttcgtagcagtacataaacctaacatgccgtg 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ccctagcatgatgatgccctgtgttcacttcgtagcagtacataaacctaacatgccgtg 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_o11.g1 MSMg01no323_o11.g1 CHROMAT_FILE:
MSMg01no323_o11.g1 PHD_FILE: MSMg01no323_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:59 2005
(666 letters)
>mm_chr5_137074251_137075316
Length = 1066
Score = 596 bits (308), Expect = e-174
Identities = 320/324 (98%)
Strand = Plus / Minus
Query: 1 taaccacttccctgcccctgactacccaccttcctcttgttcaaacttcaagtttgtttg 60
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 324 taaccacttccctgcccctgactacccagcatcctcttgttcaaacttcaagtttgtttg 265
Query: 61 ttttttgaggggggtcttctaaacaaacccatcttcttagtttactctttgtcttctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttttgaggggggtcttctaaacaaacccatcttcttagtttactctttgtcttctatc 205
Query: 121 cctgtgtttgtttgtttgtttgtttgtttttggtttttttccccctgagacagaatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cctgtgtttgtttgtttgtttgtttgtttttggtttttttccccctgagacagaatttct 145
Query: 181 ctgtatagccctggctgtcctggaactcactttgtagaccaggctgacctcgaactcatg 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 144 ctgtatagccctggctgtcctggaactcactctgtagaccaggctgacctcgaactcatg 85
Query: 241 atccttctgcctctgcctccttcagcaaatcctaccggcatgtgccagcactactggcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atccttctgcctctgcctccttcagcaaatcctaccggcatgtgccagcactactggcct 25
Query: 301 atccttgttttataccaaaccaaa 324
|||||||||||| |||||||||||
Sbjct: 24 atccttgttttaaaccaaaccaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
