Query= MSMg01no324_d06.b1 MSMg01no324_d06.b1 CHROMAT_FILE:
MSMg01no324_d06.b1 PHD_FILE: MSMg01no324_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:27 2005
(233 letters)
>mm_chr5_125627104_125627736
Length = 633
Score = 426 bits (220), Expect = e-124
Identities = 231/236 (97%), Gaps = 4/236 (1%)
Strand = Plus / Minus
Query: 2 tgagcttaggcccggggttggggttgagcacactgccagacgctccgagcaaaggtagct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgagcttaggcccggggttggggttgagcacactgccagacgctccgagcaaaggtagct 284
Query: 62 ggacagcagcatttacgtgatgtgtctgaagtcagaaaactgcagccatgtgggccagag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggacagcagcatttacgtgatgtgtctgaagtcagaaaactgcagccatgtgggccagag 224
Query: 122 ccttcttgttggggtaagctgtctc---ttcttcctcttcctcctcctcctccttttt-a 177
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 223 ccttcttgttggggtaagctgtctcctcttcttcctcttcctcctcctcctcctttttta 164
Query: 178 aaaaaaatatatgacctgtgacttttatctcagagtatctttttttctccccttgt 233
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aaaaaaaaatatgacctgtgacttttatctcagagtatctttttttctccccttgt 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no324_d06.g1 MSMg01no324_d06.g1 CHROMAT_FILE:
MSMg01no324_d06.g1 PHD_FILE: MSMg01no324_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:27 2005
(236 letters)
>mm_chr5_125448488_125449123
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%)
Strand = Plus / Plus
Query: 1 gtgtcacgcttggcagcaagcccctttctctgtcaagccatgttgccagcccctgcgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtcacgcttggcagcaagcccctttctctgtcaagccatgttgccagcccctgcgttc 260
Query: 61 ttcattatttgttgtggtggtgttgttttgggactggatcttgctaggcagctacgcagg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ttcattatttgttgtggtggtgttgttttgggactggatcttgctaggcagctatgcagg 320
Query: 121 cccctgctgaacatcagataaaaataagaagtgcaggtgctggagagatggctcagtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccctgctgaacatcagataaaaataagaagtgcaggtgctggagagatggctcagtggt 380
Query: 181 taagagcattgagtactcttctagaggaccagagttcaattcccagcacccatgtg 236
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 taagagcattgagtactcttctagagaaccagagttcaattcccagcacccatgtg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
