Query= MSMg01no326_p08.b1 MSMg01no326_p08.b1 CHROMAT_FILE:
MSMg01no326_p08.b1 PHD_FILE: MSMg01no326_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:45 2005
(689 letters)
>mm_chr5_152237891_152238979
Length = 1089
Score = 1265 bits (654), Expect = 0.0
Identities = 678/686 (98%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 5 gaattctctatactcatttccagagtagctgtacaatagttcaagcctcctttgccagag 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctatactgatttccagagtagctgtacaatagttcaagcctcctttgccagag 264
Query: 65 agtcaattctctgtctgtcccatagaagatctcaactatcactaaaagtcctgttatcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtcaattctctgtctgtcccatagaagatctcaactatcactaaaagtcctgttatcct 324
Query: 125 ccaaaagataaagaaagcccaatacaaaaatatttagttcatatattataggtctaagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaaaagataaagaaagcccaatacaaaaatatttagttcatatattataggtctaagtt 384
Query: 185 attgacatgtattgagttttgaatatttatatttttacaagttaataagaaccatgcata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attgacatgtattgagttttgaatatttatatttttacaagttaataagaaccatgcata 444
Query: 245 atttactaaaatgtgattttagcaatagtttgtattcagaatagattgtctgtgagacac 304
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttactaaaatgtgattttagcgatagtttgtattcagaatagattgtctgtgagacac 504
Query: 305 agtgaggtgctcatttattttgttaaatagacacacaacaaaaactagtgaaaagtaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 agtgaggtgctcatttattttgttaaatagacacacaacaaaaactagtgaaaagtaggc 564
Query: 365 caataatttcatcttactacactaattgattttattagagagacttagttaattcaccca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caataatttcatcttactacactaattgattttattagagagacttagttaattcaccca 624
Query: 425 aatggtcattttttaatacaatgtcttttatttttaaaacatctcaaagtgttcttctca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatggtcattttttaatacaatgtcttttatttttaaaacatctcaaagtgttcttctca 684
Query: 485 ggttctcttagaataatgtagcacttagggaaaaagatacatgctagcaatcctgcactg 544
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 685 ggttctcttagaataatgtagcacttagggaaaaagattcatgctagcaaccctgcactg 744
Query: 545 gaggccaagatggagaagatctccacagccacca-tggccttggccttggtgctctggta 603
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 745 gaggccaagatggagaagatctccacagccaccaatggccttggccttggtgctctggta 804
Query: 604 gacagggacaaaggtgatccaaacacttgcagaacaccaccatgctgaatgtcaggaact 663
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 805 gacagggacaaaggtgatccagacact-gcagaacaccaccatgctgaatgtcaggaact 863
Query: 664 tggcttcattgaatgtatcaggaagg 689
||||||||||||||||||||||||||
Sbjct: 864 tggcttcattgaatgtatcaggaagg 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_p08.g1 MSMg01no326_p08.g1 CHROMAT_FILE:
MSMg01no326_p08.g1 PHD_FILE: MSMg01no326_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:45 2005
(648 letters)
>mm_chr5_152439934_152440982
Length = 1049
Score = 1178 bits (609), Expect = 0.0
Identities = 639/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 1 aagtccaaatgttagttgctgggtgatacagatgactaggctggggtggctgataaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aagtccaaatgttagttgctgggtgatacagatgactaggctggggtggctgataaagaa 634
Query: 61 taaatagaagaagcagaagcatatgaagataataaagatacagcttagaggtctagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 taaatagaagaagcagaagcatatgaagataataaagatacagcttagaggtctagtatt 574
Query: 121 gcccttgacaatggatgtgccttagcacattacaaaatgaccagaaacctagctatgatg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gcccttgacaatggatgttccttagcacattacaaaatgaccagaaacctagctatgatg 514
Query: 181 aaagagaagattagaggtgtgccaggcaaagccatgactgatcatttgtttggggagata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aaagagaagattagaggtgtgccaggcaaagccatgactgatcatttgtttggggagata 454
Query: 241 ggtttatctcactgttgaggtactcttgaattgggctctggtacacacttcgtatttata 300
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 453 ggtttatcttactgttgaggtactcttgaattgggctctggtacacacttcttatttata 394
Query: 301 gagaagaaattgtcaggatttaatgttcaagaaatgactatcaacaaagtgattaaaata 360
|||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||
Sbjct: 393 gagaagaaattgtcaggatttaatgttcaagaaatggctattaataaagtgattaaaata 334
Query: 361 tcaattattctaaataaaagattgaagaaaaagcattagtacatatggacagagacatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tcaattattctaaataaaagattgaagaaaaagcattagtacatatggacagagacatac 274
Query: 421 aggtttgcacacactgaaattctgtaaaagcatgaag-aagaagtgatagagcctacaaa 479
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 273 aggtttgcacacactgaaattctgtaaaagcatgaagcaagaagcgatagagcctacaaa 214
Query: 480 gatgcctttcagtttgactttgttttgtgttggccatctattgctgggcatggggcctac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gatgcctttcagtttgactttgttttgtgttggccatctattgctgggcatggggcctac 154
Query: 540 ccttaaagcatagtttgttgttctagtagaactcccttgaaaagaaaagttttattttta 599
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 153 ccttaaagcatagtttgttgttctagtagaactcccttgaaaagaaaggttttattttta 94
Query: 600 agtggttatcagttggatgtagcttctgagttagtgacggaacatgtgt 648
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 93 agtggttatcagttggatgtagcttctgagttagtgatggaacatgtgt 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
