TAATTCTACTCTTCTATAATTGCGGCGCTATACGACTCCTATATTCAGAG
GTCCGCGGAATCAGTCAACATAGCAGATTAGAGCACAGTCCAGTCAGTCA
GCTGCTTTGTTTGAAATAGCACAGTGTATATCCTCATCTTTTTACATAAA
TAAATAGAAGAATGGGATAAGACAGTAATAGAGAGGAATTTAGACATTTG
TTTTAGATTCTTGCTAGACCTGACCAACCTAATTTAAATACTCTATAGAA
ATTTATATGTCCCTTCTTAAATACTCTTGAAAGCGCCCAATTCTAAAACA
CTTACTGATGAGAATATTCCATCAACTCCCTAAATGAATATTACCATGGC
CTTAAATTTTTAAGGAAGGGGGTCAATTTTTTAAACCCCCCCCCCCCCCC
CCCACAGGGGTACTTGGATCCGGTTAAAAAAAATTCAATAACCTCCTGGG
GGTTCCCCCTTTGTAGGGTCTAAAAAAAAGGGGGTTTACCCCAATCGGGA
TTATCCCCCTTTTTTTTGAGGGCCCCCCAAAAAAAAAAATTTTTGGGGAA
TATTTTTTAAAAAACAACGGGGGGGGGGGGGGGGAAATTCTCCAAAATAT
GTTTTTCCCGGGGGAAAAATTTTTTCCN

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTATTTAAAAAACAAGAAATGAAATC
GCTCATTTTATTAGAACTACTATAAGGATAAGAAAAGAGAACACATGTCT
CTCGTAAAGTCCTTGTCACATAGTAATGCTTTAATTAATAAGCATAATTT
GCCAGACACTGTCTGGCCAAGAAACCAATATATATGGAAATAACTTGAGT
TCAAAAATGCAGACAGACATTGGTTTAATAGATGGACCATAATATTTTTT
CTATGAATCTTGCTCTTTGAAATTCAGTCATCATTTACTTTCATATTGAC
TGAAATTATTAAAGGAACAATTGTTATATGATGTATACTTGGGTGCTTCA
CATATTTCTACTTGAGGTATTCAAACATATCCAGTCAGGAGCAGCAGGAT
ACACAAGCCTTTGGATAATTCAAGGGAGATATTTACATTAATTGTGTAGT
AGAAAGCAAAGTAAATGTTCTATAATTTATGAAAAAAGAAATTAAGATAC
AGAAATAGGCAGCAGAGGGCTTATGATGGATTTAGGACCTTGAAAGATAG
TACAGTTTATGCAGTACTAGACAAAGCTCTATTTGCACAGTTTCTGAAGG
AGTAATTATGTTTGTGTCTCACAGAATCTTGGAGGTTAGAACACATGCAC
ACCAGCTTTGATACTGAAACACAGA

Query= MSMg01no327_a12.g1 MSMg01no327_a12.g1 CHROMAT_FILE:
MSMg01no327_a12.g1 PHD_FILE: MSMg01no327_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:51 2005
         (638 letters)



>mm_chr5_71592456_71593493
          Length = 1038

 Score = 1180 bits (610), Expect = 0.0
 Identities = 631/638 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttatttaaaaaacaagaaatgaaatcgctcattttattagaactactataaggataaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatttaaaaaacaagaaatgaaatcgctcattttattagaactactataaggataaga 260

                                                                       
Query: 61  aaagagaacacatgtctctcgtaaagtccttgtcacatagtaatgctttaattaataagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagagaacacatgtctctcgtaaagtccttgtcacatagtaatgctttaattaataagc 320

                                                                       
Query: 121 ataatttgccagacactgtctggccaagaaaccaatatatatggaaataacttgagttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatttgccagacactgtctggccaagaaaccaatatatatggaaataacttgagttca 380

                                                                       
Query: 181 aaaatgcagacagacattggtttaatagatggaccataatattttttctatgaatcttgc 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 aaaatgcagacagacattggtttaatagatggaccataataatttttctatgaatcttgc 440

                                                                       
Query: 241 tctttgaaattcagtcatcatttactttcatattgactgaaattattaaaggaacaattg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttgaaattcagtcatcatttactttcatattgactgaaattattaaaggaacaattg 500

                                                                       
Query: 301 ttatatgatgtatacttgggtgcttcacatatttctacttgaggtattcaaacatatcca 360
           |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 501 ttatatgatgtatacttgggtgcttcacatatttctacttgaggtatttaaatatatcca 560

                                                                       
Query: 361 gtcaggagcagcaggatacacaagcctttggataattcaagggagatatttacattaatt 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcaggggcagcaggatacacaagcctttggataattcaagggagatatttacattaatt 620

                                                                       
Query: 421 gtgtagtagaaagcaaagtaaatgttctataatttatgaaaaaagaaattaagatacaga 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 gtgtagtagaaagcaaagtaaatgttctataatttatgaaaaaagaaattaagatacaaa 680

                                                                       
Query: 481 aataggcagcagagggcttatgatggatttaggaccttgaaagatagtacagtttatgca 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 aataggcagcagagggcttatgatggatttaggaccttgaaagatagtacagtttatgta 740

                                                                       
Query: 541 gtactagacaaagctctatttgcacagtttctgaaggagtaattatgtttgtgtctcaca 600
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcactagacaaagctctatttgcacagtttctgaaggagtaattatgtttgtgtctcaca 800

                                                 
Query: 601 gaatcttggaggttagaacacatgcacaccagctttga 638
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaatcttggaggttagaacacatgcacaccagctttga 838


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)