Query= MSMg01no327_h12.b1 MSMg01no327_h12.b1 CHROMAT_FILE:
MSMg01no327_h12.b1 PHD_FILE: MSMg01no327_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:22 2005
(255 letters)
>mm_chr5_8132294_8132947
Length = 654
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 6 ggaattcctagagttttcagctaactcacccttgaacctccaccctgttcttgcaggata 65
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggaattcctagag-cttgagctaactcacccttgaacctccaccctgttcttgcaggata 396
Query: 66 ttgtgacacttatgtgtggtgactgcagaagttacgttacctataagaattgcagttatt 125
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 395 ttgtgacacttatgtgtggtgactgcagaagttatgttacctataagaattgcagttatt 336
Query: 126 aaaatagcagttgcttcggtaactgttttgtaaaggctgtcatcttaaacagtttaagtg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aaaatagcagttgcttcggtaactgttttgtaaaggctgtcatcttaaacagtttaagtg 276
Query: 186 tgcatttttcttttaacgtgggactatgagaggatggttttttttttactgttttcacag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgcatttttcttttaacgtgggactatgagaggatggttttttttttactgttttcacag 216
Query: 246 ttttgtacat 255
||||||||||
Sbjct: 215 ttttgtacat 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 654
Length adjustment: 9
Effective length of query: 246
Effective length of database: 645
Effective search space: 158670
Effective search space used: 158670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no327_h12.g1 MSMg01no327_h12.g1 CHROMAT_FILE:
MSMg01no327_h12.g1 PHD_FILE: MSMg01no327_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:23 2005
(331 letters)
>mm_chr5_7975911_7976641
Length = 731
Score = 632 bits (327), Expect = 0.0
Identities = 330/331 (99%)
Strand = Plus / Plus
Query: 1 tcttgccagactggaaacaaactatttgttgactctgttttcacttgtgtgaaactgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgccagactggaaacaaactatttgttgactctgttttcacttgtgtgaaactgggc 260
Query: 61 ccatttatggcccgagtttagccacagtcatatatgatgtggtgcccacattcaagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatttatggcccgagtttagccacagtcatatatgatgtggtgcccacattcaagagaa 320
Query: 121 agatgagaccactcatgctgcagaaaacctcagcttatagcaacattatgtgcctaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgagaccactcatgctgcagaaaacctcagcttatagcaacattatgtgcctaacat 380
Query: 181 taccctcaaccaaaaagcttggtctttcgctgttggaaacacacatgccagttcgttcat 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 taccctcaaccaaaaagcttggtctttcgctgttggaaacgcacatgccagttcgttcat 440
Query: 241 agcatcatcttgctagataaaattctttatctctgtttcaaaaatagtttgctgttgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcatcatcttgctagataaaattctttatctctgtttcaaaaatagtttgctgttgtat 500
Query: 301 tttttatgtggtgcctatataaagcttaatg 331
|||||||||||||||||||||||||||||||
Sbjct: 501 tttttatgtggtgcctatataaagcttaatg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
