Query= MSMg01no327_i16.b1 MSMg01no327_i16.b1 CHROMAT_FILE:
MSMg01no327_i16.b1 PHD_FILE: MSMg01no327_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:28 2005
(333 letters)
>mm_chr5_37436712_37437444
Length = 733
Score = 545 bits (282), Expect = e-159
Identities = 295/302 (97%), Gaps = 5/302 (1%)
Strand = Plus / Plus
Query: 1 gcaggtggttatttctttatatatatttcatgaatgtgtgttggcaattgtgttcacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaggtggttatttctttatatatatttcatgaatgtgtgttggcaattgtgttcacatg 260
Query: 61 tgtgtgcatgtgtatatatgtctgtgtaccgtggagccccgcccccaaacctcccaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgtgcatgtgtatatatgtctgtgtaccgtggagccccgcccccaaacctcccaggat 320
Query: 121 gacatcatttgccttccttgatcactctccaccttacgtattgacaaaaagtctcttact 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gacatcatttgccttccttgatcactctccacct-----attgacaaaaagtctcttact 375
Query: 181 gaacctggagcttgccatgtcaaccagtctgagtagccagtttgctctggagcaccacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaacctggagcttgccatgtcaaccagtctgagtagccagtttgctctggagcaccacct 435
Query: 241 gtctctgtttctcctgtgctgggattgcaggaggaccctcatacctactccttttttttt 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtctctggctctcctgtgctgggattgcaggaggaccctcatacctactccttttttttt 495
Query: 301 tt 302
||
Sbjct: 496 tt 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_i16.g1 MSMg01no327_i16.g1 CHROMAT_FILE:
MSMg01no327_i16.g1 PHD_FILE: MSMg01no327_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:28 2005
(341 letters)
>mm_chr5_37634820_37635560
Length = 741
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%)
Strand = Plus / Minus
Query: 1 ttctgctctaagtccctactatagagtgctttgggaggcctcagacacagccttttgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ttctgctctaagtccctactatagagtgctttgggaggcctcagacacagccttttgtca 478
Query: 61 ggtccttaagaagccagggagaaaggacagaggggacccgggtgggaaaaacacaggagc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggtccctaagaagccagggagaaaggacagaggggacccgggtgggaaaaacacaggagc 418
Query: 121 aggtgaagcaactagggtccagaaacgctaaggaacatctacccggtcggccatggcgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aggtgaagcaactagggtccagaaacgctaaggaacatctacccggtcggccatggcgaa 358
Query: 181 gcgggagacaaagcttgtgtgaatgaccctgaccagcgccatgaagccagaaggacagtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 357 gcgggagacaaagcttgtgtgaatgaccctgaccagcgccatgaagccagaaggacagct 298
Query: 241 ccaggccagtctcaaagagcactcgcctccgtggtattccctttgagggaagcagagaac 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ccaggccagtcacaaagagcactcgcctccgtggtattccctttgagggaagcagagaac 238
Query: 301 agactgccactcccgggtctcagatgaagacatctta 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 agactgccactcccgggtctcagatgaagacatctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
