Query= MSMg01no327_j17.b1 MSMg01no327_j17.b1 CHROMAT_FILE:
MSMg01no327_j17.b1 PHD_FILE: MSMg01no327_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:32 2005
(375 letters)
>mm_chr5_37644504_37645278
Length = 775
Score = 598 bits (309), Expect = e-175
Identities = 361/385 (93%), Gaps = 14/385 (3%)
Strand = Plus / Plus
Query: 4 ggaattccaagtcccttctcctagaatctttacagttacaggtcacacttcatagggcag 63
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 192 ggaattccaagtctcttctcctagaatctttacagttacaggttacacttcatagggcag 251
Query: 64 ctgggcttgctctgggacagctatgctccag--gtgtgtgtgtgtatgagtgtgc----- 116
||||||||||||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 252 ctgggcttgctctgggacagctatgctcccggtgtgtgtgtgtgtgtgagtgtgcgtgtg 311
Query: 117 -----atgtgtttcttttgtgaagtgcccttgtttggcttgagaaatgactcacttctct 171
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 312 tgtgtgtgtgtttcttttgtgaagtgcccttgtttggcttgagaaatgactcactcctct 371
Query: 172 gccctcttgctgctctcagagatggttaaccttctcaaaacaccgcaggtcattctctgt 231
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 372 gccctcttgctgctctcagagacggttaaccttctcaaaacaccgcaggtcattctctgt 431
Query: 232 gctgaggacagcatcatgtttggcttctcttcctctctgtaccagtttgctttctattgc 291
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 432 gctgaggacagcatcatgtttggcttctcttcctctctgtcccagtttgctttctattgc 491
Query: 292 tgtgataaacactctagccaaaaatcttcccaatttagggaagaaaagggtttactt-gg 350
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 492 tgtgataaacactctagccaaaaatcttcccaatttagggaagaaaagggttta-ttagg 550
Query: 351 cttacagttcgaagtcatagtatat 375
|||||||||| ||||| ||||||||
Sbjct: 551 cttacagttccaagtcgtagtatat 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_j17.g1 MSMg01no327_j17.g1 CHROMAT_FILE:
MSMg01no327_j17.g1 PHD_FILE: MSMg01no327_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:32 2005
(346 letters)
>mm_chr5_37812026_37812771
Length = 746
Score = 565 bits (292), Expect = e-165
Identities = 328/346 (94%), Gaps = 10/346 (2%)
Strand = Plus / Minus
Query: 1 ctcttatgttccacagagtcctagtgccatggacatggggacacactcaagagtgtggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 742 ctcttatgttccacagagtcctagtgccatggacatggggacacactcaagaatgtggag 683
Query: 61 gtgtgctgtgggtagagcaatgcaaacatggaggcttggaaggtggcctgacagagtgtt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 682 gtgtgctgtgggtagagcaatgcaaacatggaggcttggaaggtagcctgacagagtgtt 623
Query: 121 ggaggccacctggctgtgtaactccaggctgaggagagggacagaggaagagttgtgtgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agaggccacctggctgtgtaactccaggctgaggagagggacagaggaagagttgtgtgg 563
Query: 181 gccttggcttcaatccagcacaggatagcacagaacacagagagagctgtcactgtgctc 240
||||| ||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 562 gcctttgcttcaatccagcacagga----------cacagagagggttgtcactgtgctc 513
Query: 241 taagctactcatctcgccatggggacagttactgctaggagtccattacctcctaggcag 300
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 taagctactcaactcgtcatggggacagttactgctaggagtccattacctcctaggcag 453
Query: 301 aaaagggcactctgatcgctgcccttcctgcaatggaccctggatc 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaaagggcactctgatcgctgcccttcctgcaatggaccctggatc 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
