Query= MSMg01no329_d17.b1 MSMg01no329_d17.b1 CHROMAT_FILE:
MSMg01no329_d17.b1 PHD_FILE: MSMg01no329_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:36 2005
(553 letters)
>mm_chr5_141434430_141435382
Length = 953
Score = 1007 bits (521), Expect = 0.0
Identities = 542/549 (98%), Gaps = 3/549 (0%)
Strand = Plus / Plus
Query: 6 gaattcaagaccatcctggatgctcacactagtccattttattcaacatactagagttcc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaagaccatcctggatgctcacactagtccattttattcaacatactagagttcc 266
Query: 66 cagccaatctaaaaaggcaagaaagagaaataagagggtggaatttggaaagaaataata 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cagccaatctaaaaaggcaagaaagagaaataagagggtggaatttggaaagaaataata 326
Query: 126 tagttgtcattttttttgcagacaacacaatttccctaaatatctaaaaggagctacaaa 185
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tagttgtcattttttt-gcagacaacacaatttccctaaatatctaaaaggagctacaaa 385
Query: 186 aaatttcctggaatcagttaacgataaccaacaacaaatattcaccaagttagcaaggtt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaatttcctggaatcagttaacgataaccaacaacaaatattcaccaagttagcaaggtt 445
Query: 246 ataggacagaagatcaatatacaacactcaagaaaacctgacatataaaaacatatgatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ataggacagaagatcaatatacaacactcaagaaaacctgacatataaaaacatatgatg 505
Query: 306 cttaagatttaagtgtataaacgatgtccacattgaaaatacaaggacatgctaagaaaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cttaagatttaagtgtataaacgatgtccacattgaaaatacaaggacatgctaagaaaa 565
Query: 366 gtcaaggacccttaaatcaaatggaagggatataccatgtccatgggctgtatgattgtt 425
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtcaaggagccttaaatcaaatggaagggatataccatgtccatgggctgtatgattgtt 625
Query: 426 caacttgttaatgatcttaggatctggagtctcggaaaattctagtctaatcttgatttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caacttgttaatgatcttaggatctggagtctcggaaaattctagtctaatcttgatttt 685
Query: 486 ttgctgttgttgttgttgagccgc-agcaaaataatttttaaatgcatattaagaagcta 544
||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 686 ttgttgttgttgttgttgagt-gttagcaaaataatttttaaatgcatattaagaagcta 744
Query: 545 gagggctga 553
|||||||||
Sbjct: 745 gagggctga 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_d17.g1 MSMg01no329_d17.g1 CHROMAT_FILE:
MSMg01no329_d17.g1 PHD_FILE: MSMg01no329_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:36 2005
(199 letters)
>mm_chr5_141600984_141601582
Length = 599
Score = 385 bits (199), Expect = e-111
Identities = 199/199 (100%)
Strand = Plus / Minus
Query: 1 tatataaacaccgaacaactgctgagctatatccccagcctgctcatctgatttcaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tatataaacaccgaacaactgctgagctatatccccagcctgctcatctgatttcaatac 305
Query: 61 tcgacttcaagctgccttctctagattctcttcctgctccatgaagctcatttccttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tcgacttcaagctgccttctctagattctcttcctgctccatgaagctcatttccttgac 245
Query: 121 tcaccaggtctaggcagatgagaagtacctggaagtaccaaataggagaaagagagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcaccaggtctaggcagatgagaagtacctggaagtaccaaataggagaaagagagaaag 185
Query: 181 agggagggggagggggaga 199
|||||||||||||||||||
Sbjct: 184 agggagggggagggggaga 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
