Query= MSMg01no329_g17.b1 MSMg01no329_g17.b1 CHROMAT_FILE:
MSMg01no329_g17.b1 PHD_FILE: MSMg01no329_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:52 2005
(623 letters)
>mm_chr5_59145820_59146842
Length = 1023
Score = 1108 bits (573), Expect = 0.0
Identities = 606/617 (98%), Gaps = 2/617 (0%)
Strand = Plus / Minus
Query: 8 aattctcctgaggttccgtcaagagggtggctgcctaatcagcttatgtaagtctcctga 67
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 aattctcctgagggtcagtcaagagggtggctgcctaatcagcttatgtaagtctcctga 764
Query: 68 cctccctgagtctccatttctatcaatcatccactggagaagattggctgatggtttaat 127
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 cctccctgagtctctatttctatcaatcatccactggagaagattggctgatggtttaat 704
Query: 128 acaatttaataacatactcaattaaagtaacatatgcatttttatcaattactttcttta 187
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 703 acaatttaataacatactcaattaaggtaacatatgcatttttatcaattactttcttta 644
Query: 188 cttgagctatttgaaaacacctatgattgatctttcctgagctagaaagtcacttatgtt 247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tttgagctatttgaaaacacctatgattgatctttcctgagctagaaagtcacttatgtt 584
Query: 248 gattaatagacattaaaatgatactaaattgattttattgattaatccattcaaatacat 307
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 583 gattaatagacattaaaatgatactaaattgattttattgatgaatccattcaaatacat 524
Query: 308 gaatgctacaagataactaatattgacttttttgagacatttcaccaatttatcaaaaat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaatgctacaagataactaatattgacttttttgagacatttcaccaatttatcaaaaat 464
Query: 368 aatatgtcacacttttaaaataacatattttgaaaactctgtaaaga-gtgtcagttcta 426
||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||||
Sbjct: 463 aatatgtcacatttttaaaataatatattttgaaaactctgtaaa-atgtgtcagttcta 405
Query: 427 tatgcatgcaagcttgaatgacattttctatcttgactcttcaaactttaataaaaatca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tatgcatgcaagcttgaatgacattttctatcttgactcttcaaactttaataaaaatca 345
Query: 487 aatgacctcaataaaccttctgtgttcattttaaaagtaaacagatttaaagtacattaa 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aatgacctcaataaaccttctgtgttcattttaaaagtaaacagatttaaagtacattaa 285
Query: 547 catttcctgaggaacaattcccattgagtcttgaatgttaattctcgtagagtaagtgtg 606
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 284 catttcctgaggaacaattcccattgagtcttgaatgttaattctcgtggagtaagtgtg 225
Query: 607 gtaaaaagagatgatac 623
|||||||||||||||||
Sbjct: 224 gtaaaaagagatgatac 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_g17.g1 MSMg01no329_g17.g1 CHROMAT_FILE:
MSMg01no329_g17.g1 PHD_FILE: MSMg01no329_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:52 2005
(248 letters)
>mm_chr5_58954121_58954767
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 245/247 (99%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 1 ataatgagtgctaagagaaaaaaaaatgtactttctcatgatgtgtggagaaactttaag 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 ataatgagtgctaagagaaaaaaaa-tgtactttctcatgatgtgtggagaaactttaag 259
Query: 61 aataatctgtataaatgcatgaaaacacatataaaatgagatgcccacaaagtttgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aataatctgtataaatgcatgaaaacacatataaaatgagatgcccacaaagtttgaagt 319
Query: 121 gaaagatctctggttaaaaaatttaaaaccaaatcctgggtttttatcccacctttgaac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaagatctctggttaaaaagtttaaaaccaaatcctgggtttttatcccacctttgaac 379
Query: 181 atttagttctcagataaaacacacacacacacaacctttatatcctaataattctggatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atttagttctcagataaaacacacacacacacaacctttatatcctaataattctggatc 439
Query: 241 agcacaa 247
|||||||
Sbjct: 440 agcacaa 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
