Query= MSMg01no330_g11.b1 MSMg01no330_g11.b1 CHROMAT_FILE:
MSMg01no330_g11.b1 PHD_FILE: MSMg01no330_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:06 2005
(317 letters)
>mm_chr5_77974095_77974811
Length = 717
Score = 414 bits (214), Expect = e-120
Identities = 291/324 (89%), Gaps = 18/324 (5%)
Strand = Plus / Plus
Query: 7 attcctcaact-atggccctacaatgtaccaggcacctcctttgacccttgagcttaaac 65
||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 199 attcctcaactaagggccc-acaatgtaccaggcacctcctttgactcttgagcttaaat 257
Query: 66 tctgaattatagccccc----tttaaattcctcctccctgccctggaagacacggaggga 121
||||||||| || | ||||||||| |||| ||| |||||||||||||||||||
Sbjct: 258 tctgaattaaag----caagttttaaattcttcctggctgtcctggaagacacggaggga 313
Query: 122 ctgattaaactaaagagccatttgcttctgtctgtaacccttataccctgtgcctcacta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctgattaaactaaagagccatttgcttctgtctgtaacccttataccctgtgcctcacta 373
Query: 182 cgctg--tct----cta--actatgttcatacttagatttgtgcacactgggtagtatag 233
| ||| ||| ||| ||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 374 ctctggctctaaccctatgactatgtgcatgcttagatttatgcacactgggtagtatag 433
Query: 234 aatgatttaaatagcacctaaatgcttgtttgcttctctaacatgttttttacccggctt 293
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 434 aatgatttttatagcacctaaatgcttgtttgcttctctaacatgtgttttacccggctt 493
Query: 294 tgtatggcacctaaaatccccacg 317
||||||||||||||||||||||||
Sbjct: 494 tgtatggcacctaaaatccccacg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_g11.g1 MSMg01no330_g11.g1 CHROMAT_FILE:
MSMg01no330_g11.g1 PHD_FILE: MSMg01no330_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:06 2005
(291 letters)
>mm_chr5_78176240_78176930
Length = 691
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%)
Strand = Plus / Minus
Query: 1 actatatgtcattgaggaaagaaataggaaccatcccaatattaagatacacctataggt 60
|||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||
Sbjct: 489 actatatgtcattgaggaaagaaataggaaacatcccaatattaagatatatctataggt 430
Query: 61 tgattgactgattcctggatcctcatacacttttcagtgacactgaagaacaatcccggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgattgactgattcctggatcctcatacacttttcagtgacactgaagaacaatcccggt 370
Query: 121 tcaggtaacccaagccctagaaaatattcaaattatgcacatacatttaagactttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tcaggtaacccaagccctagaaaatattcaaattatgcacatacatttaagactttcagt 310
Query: 181 gtgtgcggggagtttatctctctgttgataatttttcttgcattaatattaagctcactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtgtgcggggagtttatctctctgttgataatttttcttgcattaatattaagctcactt 250
Query: 241 tacaattcccttgaatataaataccataacagtaggggggagcagtctg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tacaattcccttgaatataaataccataacagtaggggggagcagtctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
