Query= MSMg01no331_f09.b1 MSMg01no331_f09.b1 CHROMAT_FILE:
MSMg01no331_f09.b1 PHD_FILE: MSMg01no331_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:13 2005
(232 letters)
>mm_chr5_68202444_68203075
Length = 632
Score = 449 bits (232), Expect = e-131
Identities = 232/232 (100%)
Strand = Plus / Minus
Query: 1 aattagtatgaagagaaaattgtatttgatcattgtttctaattaattaaaataatctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aattagtatgaagagaaaattgtatttgatcattgtttctaattaattaaaataatctcc 373
Query: 61 agattaactataaacaaggttttatttgtactttttattttattggggttttcaccttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agattaactataaacaaggttttatttgtactttttattttattggggttttcaccttat 313
Query: 121 tagatgccttgatttcttctcattctattttagtattctgagtttcctctccatttatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tagatgccttgatttcttctcattctattttagtattctgagtttcctctccatttatct 253
Query: 181 tgtcttattgaaagaaacagtaagtttgctatttttagcactccatggtaga 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtcttattgaaagaaacagtaagtttgctatttttagcactccatggtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no331_f09.g1 MSMg01no331_f09.g1 CHROMAT_FILE:
MSMg01no331_f09.g1 PHD_FILE: MSMg01no331_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:13 2005
(246 letters)
>mm_chr5_68037232_68037879
Length = 648
Score = 408 bits (211), Expect = e-118
Identities = 239/253 (94%), Gaps = 9/253 (3%)
Strand = Plus / Plus
Query: 1 tacaggcaggagcagaattatatttggctggctagaagccaaccatactttgcacttgtc 60
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 194 tacaggcaggggcagaattatatttggttggctagaagccaaccatactttgcacttgtc 253
Query: 61 ctagaagtaggtggtcaaaaactcagttcttgtcatcagac-------ccacagttgctt 113
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 254 ctagaagtaggtggtcaaaaactcagttcttgtcatcagacccactagccacagttgctt 313
Query: 114 aagtgattggggg--gggggggtctcaaactcttctgtggtactcattttgaagataaaa 171
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aagtgatcaggggaagggggggtctcaaactcttctgtggtactcattttgaagataaaa 373
Query: 172 tcgacacagagacatctggacatgaaggggacttaatgtgtactgagagaggttcagtta 231
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcgacacagagacatctggacacgaaggggacttaatgtgtactgagagaggttcagtta 433
Query: 232 gaactgagcttgg 244
|||||||||||||
Sbjct: 434 gaactgagcttgg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 648
Length adjustment: 9
Effective length of query: 237
Effective length of database: 639
Effective search space: 151443
Effective search space used: 151443
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
