Query= MSMg01no331_n06.b1 MSMg01no331_n06.b1 CHROMAT_FILE:
MSMg01no331_n06.b1 PHD_FILE: MSMg01no331_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:47 2005
(371 letters)
>mm_chr5_30047127_30047897
Length = 771
Score = 640 bits (331), Expect = 0.0
Identities = 363/381 (95%), Gaps = 15/381 (3%)
Strand = Plus / Plus
Query: 3 gaattcgtgttctttcc----cacaatcagtaattatttgactctagaataaactatccc 58
|||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcgtgttc---ccaggccacaatcagtaattatttgactctagaataaactatccc 258
Query: 59 cttgaggggacaaagaaaaccctctccattttcctatagagtcagcctcctcccagagca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cttgaggggacaaagaaaaccctctccattttcctatagagtcagcctcctcccagagca 318
Query: 119 ggagatgagggagggagtgtgccctaaggaatggtcacattcttcctgtccttgaagcct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggagatgagggagggagtgtgccctaaggaatggtcacattcttcctgtccttgaagcct 378
Query: 179 cagattgctcctgttttgagtgagacaaaacaaaaagcatatttatttatttattta-tt 237
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||
Sbjct: 379 cagattgctcctgttttgagtgagacaaaacataaagcatatttatttatttacttactt 438
Query: 238 -------tacttacttacttacttatttgtggtgtgtgtgtgtgttatgtgtgaatacct 290
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 439 acttacttacttacttacttacttatttgtggtgtgtgtgtgtggtatgtgtgaatacct 498
Query: 291 ttgtaagtgagtctgcaggtcagaggataactttttggggttggttctatacttcctggg 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttgtaagtgagtctgcaggtcagaggataactttttggggttggttctatacttcctggg 558
Query: 351 tgtgatccagggattgagctc 371
|||||||||||||||||||||
Sbjct: 559 tgtgatccagggattgagctc 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_n06.g1 MSMg01no331_n06.g1 CHROMAT_FILE:
MSMg01no331_n06.g1 PHD_FILE: MSMg01no331_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:48 2005
(124 letters)
>mm_chr5_30201855_30202378
Length = 524
Score = 232 bits (120), Expect = 5e-66
Identities = 123/124 (99%)
Strand = Plus / Minus
Query: 1 tgtgtctccttaaccagctcttctccattcatccaatctgaaacatctctgctgtggatc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 324 tgtgtctccttaaccagctcttctccattcacccaatctgaaacatctctgctgtggatc 265
Query: 61 tttgtctcatgactttcattttcttatagcccatggcccatcctgagatgtcttgcctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgtctcatgactttcattttcttatagcccatggcccatcctgagatgtcttgcctag 205
Query: 121 ttta 124
||||
Sbjct: 204 ttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
