Query= MSMg01no333_a21.b1 MSMg01no333_a21.b1 CHROMAT_FILE:
MSMg01no333_a21.b1 PHD_FILE: MSMg01no333_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:08 2005
(349 letters)
>mm_chr5_27493030_27493778
Length = 749
Score = 659 bits (341), Expect = 0.0
Identities = 344/345 (99%)
Strand = Plus / Plus
Query: 1 accctgttcttgggccatggtcgttacacttgtctcaaacgctgatcactaaatctcctt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctgttcttgggccatggtggttacacttgtctcaaacgctgatcactaaatctcctt 260
Query: 61 tataaatgagttttccttttgattcagaatatgtttgtgatattattgatttcttgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataaatgagttttccttttgattcagaatatgtttgtgatattattgatttcttgtgaa 320
Query: 121 aatgtgtattttatacttgatgaggtaatttatgatatacaggtaataaatatgccctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtgtattttatacttgatgaggtaatttatgatatacaggtaataaatatgccctat 380
Query: 181 ccctaaaatctcctcaattttttccctcaaaaattaactgatgcctgttcacgaattcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctaaaatctcctcaattttttccctcaaaaattaactgatgcctgttcacgaattcaa 440
Query: 241 ctgacagacatctttactttcaggtaccaagtttgaaatagaccttgaagtgaaagtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgacagacatctttactttcaggtaccaagtttgaaatagaccttgaagtgaaagtgtg 500
Query: 301 aataaaaacataaaggggtaaatgatagctagatatatgaatgaa 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataaaaacataaaggggtaaatgatagctagatatatgaatgaa 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_a21.g1 MSMg01no333_a21.g1 CHROMAT_FILE:
MSMg01no333_a21.g1 PHD_FILE: MSMg01no333_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:08 2005
(350 letters)
>mm_chr5_27699054_27699803
Length = 750
Score = 627 bits (324), Expect = 0.0
Identities = 342/348 (98%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1 ttcagtcatttgttgcatggttcctgcctcctaagcaaatatattcaactacccttggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttcagtcatttgttgcatggttcctgcctcctaagcaaatatattcaactacccttggag 488
Query: 61 aaaggaaggctcagatgttactgggctgagagtcacatgtccctgaacttgtacaacgca 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaaggaaggctcagatggcactgggctgagagtcacatgtccctgaacttgtacaacgca 428
Query: 121 aggccgctaagtgatcatgggtttaaaactaactgatgcccagtccttcaacctcaagta 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 427 aggccgctaagtgatcatgggtttaaaactaattgatgcccagtccttcaacctcaagtt 368
Query: 181 ggagatgatacaagcaggagggtgaacatagattaagcaggatataagagaatgtgcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggagatgatacaagcaggagggtgaacatagattaagcaggatataagagaatgtgcaga 308
Query: 241 gcagtgcccagcatgacacag-tcagtcagtatgctgcagagctgttcatctgacacaat 299
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcagtgcccagcatgacacagat-agtcagtatgctgcagagctgttcatctgacacaat 249
Query: 300 atgaagctatgtttcccagctctgctgtgctctggtggaggcattatg 347
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atgaagctatgtttcccagctctgctgtgctctggtggaggcattatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
