MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-333K16
Chromosome	5 (Build37)
Map Location	148,880,271 - 148,880,634
singlet/doublet	singlet
Overlap gene	C130038G02Rik
Upstream gene	Lnx2, Rpo1-3, Gsh1, Pdx1, Cdx2, EG231903, LOC622952, Flt3, Map1lc3-ps3, LOC384254, LOC100039805, Pan3, Flt1, LOC100039825, Pomp, Slc46a3
Downstream gene	LOC100041819, Slc7a1, LOC100041842, Ubl3, 2210417A02Rik, LOC100041869, Katnal1, 8430423G03Rik, 1810059H22Rik, LOC667386, LOC100039964, Hmgb1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lnx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140887 MGI:2155959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpo1-3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20018 MGI:108403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gsh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14842 MGI:95842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18609 MGI:102851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12591 MGI:88361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG231903 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231903 MGI:3647519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622952 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	Flt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14255 MGI:95559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map1lc3-ps3 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606519
definition	note : microtubule-associated protein 1 light chain 3 pseudogene 3 pseudo : _no_value

name	LOC384254 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039805 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pan3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72587 MGI:1919837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Flt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14254 MGI:95558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039825 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Pomp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66537 MGI:1913787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc46a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71706 MGI:1918956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C130038G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77521 MGI:1915388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041819 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins pseudo : _no_value

name	Slc7a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11987 MGI:88117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Ubl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24109 MGI:1344373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210417A02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70138 MGI:1917388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100041869 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Katnal1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231912 MGI:2387638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8430423G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71473 MGI:1918723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	1810059H22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69820 MGI:1917070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	LOC667386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100039964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Hmgb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15289 MGI:96113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lnx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328410 GeneID:140887 MGI:2155959
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligand of numb-protein X 2 transcript_id : NM_080795.3

name	Rpo1-3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677790 GeneID:20018 MGI:108403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA polymerase 1-3 transcript_id : NM_009087.1

name	Rpo1-3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362039 GeneID:20018 MGI:108403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA polymerase 1-3 transcript_id : NM_181730.3

name	Gsh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130916 GeneID:14842 MGI:95842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : genomic screened homeo box 1 transcript_id : NM_008178.2

name	Pdx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560657 GeneID:18609 MGI:102851
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pancreatic and duodenal homeobox 1 transcript_id : NM_008814.2

name	Cdx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560721 GeneID:12591 MGI:88361
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caudal type homeo box 2 transcript_id : NM_007673.2

name	EG231903 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89179305 GeneID:231903 MGI:3647519
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG231903 transcript_id : NM_001039678.1

name	Flt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122937352 GeneID:14255 MGI:95559
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FMS-like tyrosine kinase 3 transcript_id : NM_010229.2

name	LOC100039805 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254746 GeneID:100039805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039805 transcript_id : XM_001473557.1

name	Pan3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61744462 GeneID:72587 MGI:1919837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae) transcript_id : NM_028291.3

name	Flt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129969 GeneID:14254 MGI:95558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FMS-like tyrosine kinase 1 transcript_id : NM_010228.3

name	Pomp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377568 GeneID:66537 MGI:1913787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome maturation protein transcript_id : NM_025624.2

name	Slc46a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802503 GeneID:71706 MGI:1918956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 46, member 3 transcript_id : NM_027872.3

name	C130038G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362771 GeneID:77521 MGI:1915388
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130038G02 gene transcript_id : NM_029920.5

name	Slc7a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801995 GeneID:11987 MGI:88117
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 transcript_id : NM_007513.3

name	LOC100041842 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254777 GeneID:100041842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100041842 transcript_id : XM_001477382.1

name	Ubl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053909 GeneID:24109 MGI:1344373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-like 3 transcript_id : NM_011908.2

name	2210417A02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254779 GeneID:70138 MGI:1917388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2210417A02 gene transcript_id : XM_001477439.1

name	LOC100041869 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254781 GeneID:100041869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041869 transcript_id : XM_001477450.1

name	Katnal1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956363 GeneID:231912 MGI:2387638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : katanin p60 subunit A-like 1 transcript_id : NM_153572.1

name	8430423G03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375855 GeneID:71473 MGI:1918723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 8430423G03 gene transcript_id : XM_990235.1

name	LOC667386 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94375857 GeneID:667386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC667386 transcript_id : XM_990264.1

name	LOC100039964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254749 GeneID:100039964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039964 transcript_id : XM_001473858.1

name	Hmgb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326547 GeneID:15289 MGI:96113
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box 1 transcript_id : NM_010439.3

name	Rpo1-3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32189421 GeneID:20018 MGI:108403
definition	GO_component : GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; snoRNA MBI-50 product : RNA polymerase 1-3 isoform 2 protein_id : NP_859419.1

name	Rpo1-3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677791 CCDS:CCDS19876.1 GeneID:20018 MGI:108403
definition	GO_component : GO:0005736 - DNA-directed RNA polymerase I complex [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; snoRNA MBI-50 product : RNA polymerase 1-3 isoform 1 protein_id : NP_033113.1

name	Gsh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680113 CCDS:CCDS19877.1 GeneID:14842 MGI:95842
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : genomic screened homeo box 1 protein_id : NP_032204.1

name	Pdx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679269 GeneID:18609 MGI:102851
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0030154 - cell differentiation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0006006 - glucose metabolism [Evidence IDA]; GO:0031016 - pancreas development [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0042127 - regulation of cell proliferation [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : pancreatic and duodenal homeobox gene 1 product : insulin promoter factor 1, homeodomain transcription factor protein_id : NP_032840.1

name	Cdx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560722 CCDS:CCDS19878.1 GeneID:12591 MGI:88361
definition	GO_component : GO:0000794 - condensed nuclear chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0001824 - blastocyst development [Evidence IMP]; GO:0001568 - blood vessel development [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001890 - placenta development [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : caudal type homeo box 2 protein_id : NP_031699.2

name	EG231903 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89179306 GeneID:231903 MGI:3647519
definition	codon_start : 1 function : catalyzes decarboxylation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline to S-(+)-allantoin product : OHCU decarboxylase protein_id : NP_001034767.1

name	Flt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122937353 GeneID:14255 MGI:95559
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0030098 - lymphocyte differentiation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 product : FMS-like tyrosine kinase 3 protein_id : NP_034359.2

name	LOC100039805 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254747 GeneID:100039805
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473607.1

name	Pan3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61744463 GeneID:72587 MGI:1919837
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : Pabp1-dependent poly A-specific ribonuclease subunit Pan3 product : PABP-dependent poly(A) nuclease 3 protein_id : NP_082567.2

name	Flt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328180 CCDS:CCDS19879.1 GeneID:14254 MGI:95558
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016477 - cell migration [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : vascular permeability factor receptor; vascular endothelial growth factor receptor product : FMS-like tyrosine kinase 1 protein_id : NP_034358.2

name	Pomp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385086 GeneID:66537 MGI:1913787
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : proteasome maturation protein protein_id : NP_079900.1

name	Slc46a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311835 CCDS:CCDS19880.1 GeneID:71706 MGI:1918956
definition	codon_start : 1 product : solute carrier family 46, member 3 protein_id : NP_082148.1

name	C130038G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75832043 CCDS:CCDS19881.1 GeneID:77521 MGI:1915388
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : hypothetical protein LOC77521 isoform b protein_id : NP_084196.4

name	Slc7a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677433 CCDS:CCDS19882.1 GeneID:11987 MGI:88117
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015359 - amino acid permease activity [Evidence IEA]; GO:0015171 - amino acid transporter activity [Evidence IEA]; GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cationic amino acid transporter 1 product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein_id : NP_031539.2

name	LOC100041842 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254778 GeneID:100041842
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477432.1

name	Ubl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755925 GeneID:24109 MGI:1344373
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ubiquitin-like 3 protein_id : NP_036038.1

name	2210417A02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254780 GeneID:70138 MGI:1917388
definition	codon_start : 1 product : hypothetical protein LOC70138 protein_id : XP_001477489.1

name	LOC100041869 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254782 GeneID:100041869
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477500.1

name	Katnal1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956364 GeneID:231912 MGI:2387638
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008568 - microtubule-severing ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : katanin p60 subunit A-like 1 protein_id : NP_705800.1

name	8430423G03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375856 GeneID:71473 MGI:1918723
definition	codon_start : 1 product : hypothetical protein LOC71473 protein_id : XP_995329.1

name	LOC667386 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94375858 GeneID:667386
definition	codon_start : 1 product : hypothetical protein protein_id : XP_995358.1

name	LOC100039964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254750 GeneID:100039964
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473908.1

name	Hmgb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754208 CCDS:CCDS19883.1 GeneID:15289 MGI:96113
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0030235 - nitric-oxide synthase regulator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006323 - DNA packaging [Evidence IEA]; GO:0006809 - nitric oxide biosynthesis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006810 - transport [Evidence IDA] codon_start : 1 note : high mobility group protein 1 product : high mobility group box 1 protein_id : NP_034569.1

name	LOC384254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384254
definition	number : 1 pseudo : _no_value

name	LOC384254 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384254
definition	number : 2 pseudo : _no_value

name	LOC100039825 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039825
definition	number : 1 pseudo : _no_value

name	LOC100039825 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039825
definition	number : 2 pseudo : _no_value

name	LOC622952 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254775 GeneID:622952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to microsomal glutathione S-transferase 3 pseudo : _no_value transcript_id : XR_033097.1

name	LOC100041819 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254776 GeneID:100041819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins product : similar to fus-like protein pseudo : _no_value transcript_id : XR_033181.1

name	1810059H22Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254748 GeneID:69820 MGI:1917070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : RIKEN cDNA 1810059H22 gene transcript_id : XR_035221.1

clone name	MSMg01-437J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-333K16.T7 (MSMg01no333_k16.b1)	MSMg01-333K16.TJ (MSMg01no333_k16.g1)
ACC	AG449358	AG449359
length	740	727
length of high quality (start - end)	371 (43 - 413)	345 (82 - 426)
definition	CHROMAT_FILE: MSMg01no333_k16.b1 PHD_FILE: MSMg01no333_k16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:20:54 2005	CHROMAT_FILE: MSMg01no333_k16.g1 PHD_FILE: MSMg01no333_k16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:20:54 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAATCCGCGGAAT TCATTCAGATGTCCGCTTGCAAGGCAATTGCTTTCCAGTGTACACGGTGA CTGCCAGGCCTATTAACCCAACCCGGTTGTTTCCGGCTCAGATACCCACA TGGCACCTGAAGCCAATCTGAGACTCAGCCTCTATCTCCTATTATTTCAC CTGTGTAAGCGTCAGTAACAAAAACTCTCACTAATGTGTTCCCTTCCTCC TCCCCTCCCACAAACACTCTGCTTAGCTTCTCAGCAAACCCGTTCCTTCC TCTCATCTCTGTGGCCAGCTCAGGGGCCCCTGACTCCTGTAAAGAGCAAA ATGACTGAATGGGGCAACCACAGGGGAATTCAAACCATCTGAGAAGGTAG AGCAGATTAATCCCGCCCCCCTAATCATAGGGAGGCAGATGGCTAGCCTG GTGCAATGGAGACAGAGCACGTTTTCTCAGTTCTGCCACTGCCCCAAGTG GACTCACTTCAGGACAATAGAATGTCTGTGCCATGCTCACTTGGTCCTCG GTGTCCCAGACCTAAGGGATGCACTCAGGCTGCCTGCGAGACTCTGTTAT CTACAGGGCTGCAGGCTATAATTCCCAGGCCTTGTGTGCTATCTAGAAAA GCAGAGATAAATCTTTTCCCATCTCATCAGGAATAAAGTAAAGCTCACCC ACAGCTCAAAAACTTGCACGGGGGTCAGCCACTATAAATG	NAAAAAGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAAGGAATGAAGACCCTA TTAAAGACAATAAAGCAGATTTTTAAATAATAATTTATTTTTTTAAATTA TAGTAAAATTATATTATTTCCCTCTCCCTTTCCTCTCTTCAACCCTTCCC ATGCAACCACTATGGTATCTCTCAAATTCATGATCTCTCTTTCCTATAAT TGTTGTTTTATGTATACATATGTATCATATATATCATATACATATGCTAT ATATAACACATACATATACACACACATACACATATATATCATATACACAC GCTATATATAACACATACACATATACACACATACACACATATATCATATA CATACGCTATATATAACACATACACGGACACACACATACACATATATATC ATATACATACACTATATATAACACATACACACATACAGATATATGTTATA TATATCATATACATATGCTATATATAACACATACACATATACACACATAC ACATATATATCATATACACGCATACACATATATATCATATACATACACTA TATATAACACATACACATATACACACATACAGATATATGTTATATATCAT ATACATACACTATATATAACACATACACATATACACACATACACATATAT ATCATATACATACACTATATATAACAC
quality values	Open. Hide. 8 8 8 8 9 14 37 39 39 37 37 32 29 31 32 32 32 32 28 37 37 37 47 25 22 11 11 11 19 19 9 9 9 17 11 9 9 8 8 8 8 8 16 22 33 34 30 30 31 31 47 36 53 33 30 22 15 10 10 16 12 14 12 12 13 21 28 26 37 37 37 44 44 53 53 57 53 53 53 53 59 59 57 53 53 53 53 53 53 59 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 43 50 43 43 43 46 57 57 57 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 57 50 53 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 23 21 10 10 10 10 11 12 16 16 14 12 15 11 11 12 15 15 13 15 25 41 43 50 50 59 59 59 57 59 59 57 59 59 59 59 59 59 59 57 57 59 59 59 59 59 57 57 57 57 57 48 48 48 57 59 59 59 59 59 68 59 59 59 59 57 57 57 48 48 48 57 43 39 43 43 40 43 47 48 48 48 41 41 41 41 41 41 43 30 30 32 37 37 37 40 46 41 43 41 41 31 36 37 37 39 37 37 39 36 43 32 32 35 35 35 59 39 39 35 32 32 39 39 41 41 41 41 39 39 39 39 31 25 39 39 47 39 39 39 36 43 36 39 37 41 37 22 21 12 12 12 19 20 25 31 31 34 28 37 35 35 35 39 37 33 30 25 32 34 28 30 25 25 34 32 30 30 23 23 20 23 23 32 32 23 23 23 32 31 39 34 28 25 22 13 19 15 15 14 24 20 20 24 22 25 20 31 28 25 28 28 31 29 22 22 13 11 11 11 11 14 12 11 8 8 8 8 10 11 20 20 23 21 12 11 12 24 24 16 16 15 15 13 11 11 11 13 13 24 17 25 22 22 22 26 29 16 15 14 14 14 10 15 11 12 12 12 12 11 16 17 9 9 9 11 12 8 9 9 12 12 9 12 12 12 12 12 19 9 8 8 8 10 10 10 12 12 17 12 10 10 10 12 12 11 11 11 11 12 20 25 21 11 10 11 11 10 12 9 6 6 7 6 8 8 11 10 10 10	Open. Hide. 0 3 17 19 8 8 6 6 6 8 10 10 10 10 9 10 12 25 24 37 35 29 29 37 37 37 37 37 37 39 37 37 37 37 37 37 25 25 9 9 9 9 12 11 12 16 15 15 13 15 18 24 28 24 37 37 39 50 53 57 59 57 57 53 53 48 42 36 36 21 21 10 18 18 28 20 42 42 47 50 50 68 68 68 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 68 68 68 68 57 57 57 57 57 57 57 57 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 57 57 59 59 59 59 59 57 57 57 57 68 68 68 57 57 57 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 59 59 44 50 44 50 50 57 57 59 59 68 68 68 68 68 68 68 57 57 57 57 57 59 57 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 57 54 54 54 54 54 57 59 59 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 50 50 50 50 41 41 36 28 19 12 12 12 12 12 11 11 11 11 11 15 15 32 30 47 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 57 57 48 48 48 48 48 48 54 54 57 54 68 68 68 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 54 54 54 59 59 59 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 68 68 68 59 57 57 68 57 57 57 57 57 52 52 52 57 57 59 59 59 54 41 38 20 20 23 43 44 57 52 52 52 57 57 59 59 59 59 59 68 68 68 59 59 59 57 57 57 57 57 57 57 57 52 52 52 57 52 57 57 59 59 59 59 57 57 57 57 59 59 59 59 59 59 57 57 57 57 52 54 59 59 59 57 57 52 57 57 57 57 59 59 57 54 43 44 35 43 43 43 43 47 54 57 57 57 57 57 54 54 54 57 57 59 57 57 57 43 43 43 59 59 59 59 57 57 59 59 59 59 59 59 48 57 48 57 44 43 42 47 47 54 59 57 57 57 59 48 40 40 32 32 26 32 28 46 43 54 54 59 57 57 47 37 32 23 23 30 23 28 15 26 26 42 39 48 48 59 59 57 57 57 57 57 57 43 43 43 43 37 37 30 30 30 30 30 39 39 34 34 28 27 29 37 34 29

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no333_k16.b1 MSMg01no333_k16.b1 CHROMAT_FILE:
MSMg01no333_k16.b1 PHD_FILE: MSMg01no333_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:54 2005
         (371 letters)



>mm_chr5_148880067_148880837
          Length = 771

 Score =  642 bits (332), Expect = 0.0
 Identities = 356/364 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattcagatgtccgcttgcaaggcaattgctttccagtgtacacggtgactgcca 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaattcattcagatgtctgcttgcaaggcaattgctttccagtgtacacggtgactgcca 509

                                                                       
Query: 65  ggcctattaacccaacccggttgtttccggctcagatacccacatggcacctgaagccaa 124
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 508 ggcctattaacccaacccggttgtttccggctcagatacccacatgacacctgaagctaa 449

                                                                       
Query: 125 tctgagactcagcctctatctcctattatttcacctgtgtaagcgtcagtaacaaaaact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tctgagactcagcctctatctcctattatttcacctgtgtaagcgtcagtaacaaaaact 389

                                                                       
Query: 185 ctcactaatgtgttcccttcctcctcccctcccacaaacactctgcttagcttctcagca 244
           ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 388 ctcactaatgtgttcccttcctcctcccctcccacaaacaccctgcctagcttctcagca 329

                                                                       
Query: 245 aacccgttccttcctctcatctctgtggccagctcaggggcccctgactcctgtaaagag 304
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 328 aacccgttccttcctctcatctctgtggccagctcaggggcccctgcctcctgtaaagag 269

                                                                       
Query: 305 caaaatgactgaatggggcaaccacaggggaattcaaaccatctgagaaggtagagcaga 364
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 268 caaaatgactgaatggcgcaaccacagggaaattcaaaccatctgagaaggtagagcaga 209

               
Query: 365 ttaa 368
           ||||
Sbjct: 208 ttaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space:   275844
Effective search space used:   275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information