Query= MSMg01no334_j07.b1 MSMg01no334_j07.b1 CHROMAT_FILE:
MSMg01no334_j07.b1 PHD_FILE: MSMg01no334_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:03 2005
(499 letters)
>mm_chr5_122670938_122671836
Length = 899
Score = 872 bits (451), Expect = 0.0
Identities = 487/499 (97%)
Strand = Plus / Plus
Query: 1 agggattccccagagcaagctggctcatgagtgggactagttaattgggagctcggggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggattccccagagcaagctggctcatgagtgggactagttaattgggagctcggggat 260
Query: 61 tgactgagagagcctgcctcagtgaataagatgggcaagctatgagggatgagtcctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactgagagagcctgcctcagtgaataagatgggcaagctatgagggatgagtcctgat 320
Query: 121 gtcatgtgaacctccacatcctatgacatcatagttgggcctccacatacacgcgtgcat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gtcatgtgaacctccacatcctatgacatcatagttgggcctccacatacacacgtgcat 380
Query: 181 gtgaatgcaagaatgaatgcatgataggtatgggtctagaggatggctctgttgataaag 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 381 gtgaatgcaagaatgaatgcatgataggtatgggtctggaggatggctctgttggtaaag 440
Query: 241 tgcatgcttgaggacctgcggtccatcccagaaccctcacagaaaggtgggcatgttccc 300
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtatgcatgaggacctgcggtccatcccagaaccctcacagaaaggtgggcatgttcct 500
Query: 301 gcatgctgtaatctcagggctcagaggaagcaggagacagaagatcactgggagtcacat 360
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 gcatgccgtaatctcagggctcagaggaagcaggagacagcagatcactgggagtcacat 560
Query: 361 ccaggcagcctaacctgtgcactccctggttcactgagaaagccactttggggagggggt 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 561 ccaggcagcctaacctgtgcactccctagttcactgagaaagccactttggggagggtgt 620
Query: 421 ggacagcacctgaggaatggcactctggccttctcatgcacacgtgtgtgcacacacacc 480
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 ggacagctcctgaggaatggcactctggccttctcatgcacacatgtgtgcacacacacc 680
Query: 481 cctacacatggatgcagag 499
|||||||||||||||||||
Sbjct: 681 cctacacatggatgcagag 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_j07.g1 MSMg01no334_j07.g1 CHROMAT_FILE:
MSMg01no334_j07.g1 PHD_FILE: MSMg01no334_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:03 2005
(244 letters)
>mm_chr5_122862738_122863381
Length = 644
Score = 412 bits (213), Expect = e-119
Identities = 237/245 (96%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 1 gaaaagggcgtcaggacccctagaactgcaattatagccagttgtgcaccattatatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaaaagggcgtcaggacccctagaactgcaattatagccagttgtgcaccattatatgag 517
Query: 61 tgctgagaactgaacttgggtcctctgcaaaagcaagcag-tgctcaacggttacactgt 119
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 516 tgctgagaactgaacttgggtcctctgcaaaagcaagcagttgctcaactgttacactgt 457
Query: 120 ttctcttgcccctcattcttcttaggcaaggaaaggggctccctgcactttaagtaagcc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 456 ttctcttgcccctcattcttcttaggcaaggaaaggggctccctgcactttaagtaggcg 397
Query: 180 gtgtggcagccagcacacagtgacgtggagaagctacaacagaggcaacgggccacactc 239
| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 396 gcgtggcagccagcacacagtgacgtggaggagctacaacagaggcaacccgccacactc 337
Query: 240 tgggc 244
|||||
Sbjct: 336 tgggc 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
