CTGXXXXXXXXXXXXXXXXXXXXXXXXXXNATGCCCGAGGTCCGCGNGAT
GTCAAGCTCTCTCCATCACCCCTCCCCCTCCTCCTCCCCCTCCCCCTCCC
CCTCCCGCTCTCCCTCTCCCTCTTCTGCCCCCTTCCTCTGTGTTCTGGTG
ATGGAACTCGGGTCTTCATGCATGCTCCGCAAGTCCTTTACCCACCAAGT
CATCTCGCCAGCCCTGCTTTTGCAGTGTTGAAGATACACGCTAGAGACTT
AGATATTCTAAGCAAGCGCTCTACCTGAGCGTGCCCTGGCCCCAGGGTGG
CTCTTGCTGAACTAATATTTATAGCATGTCAGCAGGGATGTGAGCCTCTG
CCTCAGGCTTCGAGCAGCTATGAGCAGGGCAGGGACATGTCACTACAGCC
TCTTCGTAATAAACTGCACGAAAACCTGTTGGCAGCGACTATCTGAGCAG
TCTGCATGGAGAACACTGCCAGCCCTACCACAGGATGTGAACAGGCGCCA
GCCAATTCCTGAAGCGGAAATGGGGACAGGAGGATAGCATCAGCAATCCC
TAAATCAGTTTGTCATTTAATTCACTTCCCATCAAAATCCCAGAATTTGC
CTCTTTTTGTGCTTGCCCAAGTGATTGTCACACTTATAAAAAATTTTGAA
ATTTTTGAAACCAAGACCATTGATCAAATTTGCTAAATTTGACCATTGTG
TGACGTGTTGATTTATGTCAGCTGTTATAAAAC

NCAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGATCAGACTGGCCTCA
AACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTG
TGCGCCACCACTGCCTGGCACCAAGGCAACTCTTATTAAAGGAAAGCATG
TAATTTGGGCTGGTTTACAGTTTCAGAGGTTCAGTCCCTTGCCATTGTGC
CAGGAAGCATGGCAGCCTGCAGGCAGACATGGTGCTGGAGAGGAAGCTGA
GAGTTCTACATCTGAATCAGCCAACAGCAAGGAGAGATTGTGAGTCACTG
GCCTGGCTTGAGCATCTGAGACCTCAAAGCCTGCTCCCGGTGACACACTT
CCTTCCCAAAACCACACCTACTCCCACAAGGACACACCTCCTAATAGTTC
CATTCCCTGTGGGCCAAGCATTCAAACACATGAATCTATGGCAGGCCAGA
CTATTCAAACCAGCACACCAGATGAGGAAGTATCTGCAGAGTGGCCCATC
CAAGCATGGCTGGGTGAGAGACTAGAAGGTATGTCAGAGCTCACATTTTT
AAGAGCCCCATTCTGCCTTCAACACCAGTGAAGCAGTTAGCCATTCAAAT
GCAGGGTCTCAGTGTATGAGGTTGTGAAATTAACAGGGGACAGGCAGACA
TTTATCACTCAAATTAGACACAGTAGCTTCTGGAAATCCG

Query= MSMg01no334_o14.g1 MSMg01no334_o14.g1 CHROMAT_FILE:
MSMg01no334_o14.g1 PHD_FILE: MSMg01no334_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:30 2005
         (664 letters)



>mm_chr5_142601344_142602407
          Length = 1064

 Score = 1203 bits (622), Expect = 0.0
 Identities = 655/668 (98%), Gaps = 4/668 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctgtagatcagactggcctcaaactcagaaatccacctgcctctgcctcccaagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actctgtagatcagactggcctcaaactcagaaatccacctgcctctgcctcccaagtgc 256

                                                                       
Query: 61  tgggattaaaggtgtgcgccaccactgcctggcaccaaggcaactcttattaaaggaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgggattaaaggtgtgcgccaccactgcctggcaccaaggcaactcttattaaaggaaag 316

                                                                       
Query: 121 catgtaatttgggctggtttacagtttcagaggttcagtcccttgccattgtgccaggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 317 catgtaatttgggctggtttacagtttcagaggttcagtcccttgtcattgtgccaggaa 376

                                                                       
Query: 181 gcatggcagcctgcaggcagacatggtgctggagaggaagctgagagttctacatctgaa 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 377 gcatggcagcctgcaggcagacatggtgctggagaagaagctgagagttctacatctgaa 436

                                                                       
Query: 241 tcagccaacagcaaggagagattgtgagtcactg----gcctggcttgagcatctgagac 296
           |||||||||||||||||||||||||||| |||||    ||||||||||||||||||||||
Sbjct: 437 tcagccaacagcaaggagagattgtgagccactgactggcctggcttgagcatctgagac 496

                                                                       
Query: 297 ctcaaagcctgctcccggtgacacacttccttcccaaaaccacacctactcccacaagga 356
           |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 497 ctcaaagcctgctcccggtgacacacttccttcccaaagccacacctattcccacaagga 556

                                                                       
Query: 357 cacacctcctaatagttccattccctgtgggccaagcattcaaacacatgaatctatggc 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cacacctcctaatagttccattccctgtgggccaagcattcaaacacatgaatctatggc 616

                                                                       
Query: 417 aggccagactattcaaaccagcacaccagatgaggaagtatctgcagagtggcccatcca 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aggccagactattcaaaccagcacaccagatgaggaagtatctgcagagtggcccatcca 676

                                                                       
Query: 477 agcatggctgggtgagagactagaaggtatgtcagagctcacatttttaagagccccatt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agcatggctgggtgagagactagaaggtatgtcagagctcacatttttaagagccccatt 736

                                                                       
Query: 537 ctgccttcaacaccagtgaagcagttagccattcaaatgcagggtctcagtgtatgaggt 596
           |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 737 ctgccttcaacaccagtgaagcagctaaccattcaaatgcagggtctcagtgtatgaggt 796

                                                                       
Query: 597 tgtgaaattaacaggggacaggcagacatttatcactcaaattagacacagtagcttctg 656
           |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 797 tgtgaagttaacaggggacaggcaggcatttatcactcaaattagacacagtagcttctg 856

                   
Query: 657 gaaatccg 664
           ||||||||
Sbjct: 857 gaaatccg 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)