ATTTGCGGCCGCAAACGACNACTATATTCAGAAACACGCGGAATCATTCC
CTCTCCCAAAAAGGAGCACCAATAAAAAGAAAACTTAAGTGCAGAGGGGA
ATNTGGNTGNCAATCCCAAAAGGNGGAGNAANNNCCCCNNCAANNNNACN
NCNCCNNNNNNNNNANNNNANAANNNNNCNNNNAAAAAANAAAANNNNCC
NNNNNNNNNNNNNNNNTTTGGGTCGCCCCTAAAAAAAANCCTGGCCAATG
GGCCCCAAAGGAAAAACTTAAAAAAAAAAAATGGGCCAAAAAAAAAAAAA
AANGCCCCCCCTCCCCCAAAAACCCCCCCAAAAGGGGGGAAAAAAAAAAA
AAAAAGGCCCAAAAACCCCCCCCCCTTTTTGCGCAAGTTTTCCTCTACTA
AAGAAAGAGAAGAAAAAAAAAAAAAAAAAAAAAAAACNNCCTCCCCCCTT
GCTNNNNNNNNNNNTCTCNCCCCNNNTAAAAAATAACAAAAAAAAAAAAA
NNNNNNNNNNNNNNNNTTTTCCCCCCTTTCNCCCNCCCCCCCAANNNNNN
NCNNNNNNNNNNNNNNNNNNGTGGGGTTCCCCCCCCCACCAAAAAAAAAA
AAACATACNCCCCCCCCACNGCAGGGNNNTTTNNTNNNNTNNNTTTTCCA
CCACAATAACAAACCACAAAAAAAG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTGCTTTTTTCTTCCATCCCAAGTAAAAGAGGGT
TGGATCCTGCATGTTCCTAGCAACAGCACCATTGCTCAGACCATCTGTAA
TTTCCAGGGGGATCTGACTCCCTCTTCTGGCCTCCATGGGAACTGTATGC
ATGTGGTACATAGACATGCAGGCAAAATATCTATCATAAGTTTAAAAAGT
CACCAAATCTTGGCATCGGGAACATTTAGGCAGATTCGAGTCTTGCTCTT
CCAACAGTAATGCTGTACAGGGCCAGGACAGCAGCCAGAGACTATTTCTA
AGCAAGGTCATCTTGAGCTTCTATGTGTACTTGAACTTTCAGGGTTGGAG
CATTTTACACTTAAAAAAATGCAGCCTTCTGAAGACTTTAGGAAATCGGT
CAAGGTGGCTCCCAGGGGCTTAAAAAGAAAGGAGCTGGGTTGACTCACAA
CCCTACCTTTGACAGGAATCTCATGTGCCTTGCTTGCTGTTTTAACTGTT
TAACAGCTGGTGAGTGACAGGTGTCAGTCGCTGGCAGAGAAGTGAGAAGC
TGCCCCCAAATGTACACTCAATGTACAGCACAATTGGCTGAGCCTGAAAA
CCCGGCAGCAAGCAAACCCTTCACAAATCTTCCTCCAGAATCTTGCTTAT
GTAAGGCCCCCCCCCGTCCAGTCCCTATTCTCTCCCATTTT

Query= MSMg01no336_c24.g1 MSMg01no336_c24.g1 CHROMAT_FILE:
MSMg01no336_c24.g1 PHD_FILE: MSMg01no336_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:11 2005
         (492 letters)



>mm_chr5_128072639_128073534
          Length = 896

 Score =  855 bits (442), Expect = 0.0
 Identities = 481/496 (96%), Gaps = 4/496 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcttttttcttccatcccaagtaaaagagggttggatcctgcatgttcctagcaacagc 60
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 876 tgcttttttcttccatcccaagtaaaagagggttggatcctgtgtgttcctagcaacagc 817

                                                                       
Query: 61  accattgctcagaccatctgtaatttccagggggatctgactccctcttctggcctccat 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 accattgctcagaccgtctgtaatttccagggggatctgactccctcttctggcctccat 757

                                                                       
Query: 121 gggaactgtatgcatgtggtacatagacatgcaggcaaaatatctatcataagtttaaaa 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 756 gggaactgtatgcatgtggtacatagacatgcaggcaaaataactatcataagtttaaaa 697

                                                                       
Query: 181 agtcaccaaatcttggcatcgggaacatttaggcagattcgagtcttgctcttccaacag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agtcaccaaatcttggcatcgggaacatttaggcagattcgagtcttgctcttccaacag 637

                                                                       
Query: 241 taatgctgtacagggccaggacagcagccagaga----ctatttctaagcaaggtcatct 296
           ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||
Sbjct: 636 taatgctgtacagggccaggacagcagccagagactctctatttctaagcaaggtcatct 577

                                                                       
Query: 297 tgagcttctatgtgtacttgaactttcagggttggagcattttacacttaaaaaaatgca 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgagcttctatgtgtacttgaactttcagggttggagcattttacacttaaaaaaatgca 517

                                                                       
Query: 357 gccttctgaagactttaggaaatcggtcaaggtggctcccaggggcttaaaaagaaagga 416
           |||||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 516 gccttctgaagactttgggaaattggtcaaggtgactcccaggggcctaaaaagaaagga 457

                                                                       
Query: 417 gctgggttgactcacaaccctacctttgacaggaatctcatgtgccttgcttgctgtttt 476
           ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 456 gctgggttgactcacgaccttacccttgacaggaatctcatgtgccttgcttgctgtttt 397

                           
Query: 477 aactgtttaacagctg 492
           ||||||||||||||||
Sbjct: 396 aactgtttaacagctg 381


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 896
Length adjustment: 10
Effective length of query: 482
Effective length of database: 886
Effective search space:   427052
Effective search space used:   427052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)