CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTTCCCCTGGAGCTCCGCTCCTTTTAGAAGATTCACACATAGCTCT
TCGCCCTTGCCTGTTCTTGCTTCAAGTTTCAGGTGACCTTGAGCCAAAGC
TGGCGATGGCGGAGGGAAAAGAAAATGGAAAACCCCCTCCTTACTCAGCA
AGATTTCAATTCTGGAGTCCTTTCTCTGTATGCTTGTTGCCATTTCATTT
GTATTTTATTTATTTAATCTTTTAAAGGTTTATTTTATTTTTTGTGTATG
AGTGCCTTGCCTGTACGGATGCCTGTGTGACTGGTACCATCAGAGGTCAA
CAGAGGGGTCAGATCCTCAACTACAGGAGTTACAGATGGCTGTGAACCAC
CATGTAGGTGCTGGGAATTGAACCTGTGTTCTCTGCAAGTGCTGAGCCAT
TTTTCTAGCCACTTATTTTTATTTTTTTTAAAAAAATATTATTTTGGCTC
TGGGAAATAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
GNGNGTGTGTGTGTGTGTGTGTGTTACCCTCAAACTTTAAGGAGTCCTCC
TGCCTCAAACTTCGAGTGCTGGAATTAACAAAAAGCCCTGCCCTGCCAGG
TGTTACCATTGATCTCTGTATGGTTAGATTCCTCTTCCAAAAGATGGGAG
TGGTTTATTTATTAAAATACTGGGAAAGCTTCC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCCTGTCTTAAAAGTCGCTTTTTCATTAA
GAGATGATTTTTCAAAGCTGATGGCAGAGCCTCTAGAAATTGTGAGACTA
GAGAAACACAGTGTGGCCAGGAAGGCCCCAAACAGCTGAAAAGGCTCAAA
CTGATAAACCCATGTTATTGTTTGAGCCAGAACTTAGGCATGAAGAGCAT
CTCCCTACCCTCCTTTCCTCTTAAAAACAAACACTAAGCCAGTCTCCATG
TTCTCCAACCTAGAAGCTAGTAATTAGAGATATCTTTCTTTTAGTTTCTT
GTTTGGTTTTAGTTCTCGTATTTACAAAACCAAACATGTTGAGTTCTGTC
CTGGTTAGTTTTCACAATGTGACACAACCTACAGGCAGTTGGAAAGAAGA
GTGTCCACTTCGAAGATCACAGTGGCCTTGGCCATTGTCAATGAAGGTGT
GTCTTGGGCAATGGTTGATGTTGGGGGACCAGCCCTCTGTGGCCAGTGCC
ATCCCTAGACAATTAGGTCTAGGCTATAACAAAACTAGCTTAGCATGGCC
CAGNCAGTGAGCCCAGGGAATAATCTAACAAGCAGTGTGACTTACCCTGT
GGCTTTTGCCTGGCCCGATTTCCTCCACAATGGAAAGACCTGACAAAGGC
CCTTTCTTCCCCCCGTTCTTTTGTTCCTTGAAAAAAAN

Query= MSMg01no336_h19.g1 MSMg01no336_h19.g1 CHROMAT_FILE:
MSMg01no336_h19.g1 PHD_FILE: MSMg01no336_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:33 2005
         (507 letters)



>mm_chr5_20800718_20801628
          Length = 911

 Score =  953 bits (493), Expect = 0.0
 Identities = 505/511 (98%), Gaps = 4/511 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctgtcttaaaagtcgctttttcattaagagatgatttttcaaagctgatggcagagcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cctgtcttaaaagtcgctttttcattaagagatgatttttcaaagctgatggcagagcct 582

                                                                       
Query: 61  ctagaaa----ttgtgagactagagaaacacagtgtggccaggaaggccccaaacagctg 116
           |||||||    |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctagaaattatttgtgagactagagaaacacagtgtggccaggaaggccccaaacagctg 522

                                                                       
Query: 117 aaaaggctcaaactgataaacccatgttattgtttgagccagaacttaggcatgaagagc 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aaaaggctcaaactgataaacccatgttattgtttgagccagaacttaggcatgaagagc 462

                                                                       
Query: 177 atctccctaccctcctttcctcttaaaaacaaacactaagccagtctccatgttctccaa 236
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atctccctaccctcctttactcttaaaaacaaacactaagccagtctccatgttctccaa 402

                                                                       
Query: 237 cctagaagctagtaattagagatatctttcttttagtttcttgtttggttttagttctcg 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cctagaagctagtaattagagatatctttcttttagtttcttgtttggttttagttctcg 342

                                                                       
Query: 297 tatttacaaaaccaaacatgttgagttctgtcctggttagttttcacaatgtgacacaac 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tatttacaaaaccaaacatgttgagttctgtcctggttagttttcacaatgtgacacaac 282

                                                                       
Query: 357 ctacaggcagttggaaagaagagtgtccacttcgaagatcacagtggccttggccattgt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctacaggcagttggaaagaagagtgtccacttcgaagatcacagtggccttggccattgt 222

                                                                       
Query: 417 caatgaaggtgtgtcttgggcaatggttgatgttgggggaccagccctctgtggccagtg 476
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 221 caatgaaggtgtgtcttgggcaatgattgatgttgggggaccagccctctgtggccagtg 162

                                          
Query: 477 ccatccctagacaattaggtctaggctataa 507
           |||||||||||||||||||||||||||||||
Sbjct: 161 ccatccctagacaattaggtctaggctataa 131


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 911
Length adjustment: 10
Effective length of query: 497
Effective length of database: 901
Effective search space:   447797
Effective search space used:   447797
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)