Query= MSMg01no336_p21.b1 MSMg01no336_p21.b1 CHROMAT_FILE:
MSMg01no336_p21.b1 PHD_FILE: MSMg01no336_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:13 2005
(534 letters)
>mm_chr5_54716642_54717575
Length = 934
Score = 781 bits (404), Expect = 0.0
Identities = 419/424 (98%)
Strand = Plus / Minus
Query: 5 gaattcttttgttacactattcccactggtcatattcccattctccactgcatggctcca 64
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaattcttttgtgagagtattcccactggtcatattcccattctccactgcatggctcca 365
Query: 65 catctaccctcttagtgacagcactatgtggaaatacgaccacatattagctgaccatgg 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 catctaccctcttagtgacagcactatgtggaaatacaaccacatattagctgaccatgg 305
Query: 125 aaatactgtatataacatatttacatatgtgtgtataggtgagtatccctgtcaatattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaatactgtatataacatatttacatatgtgtgtataggtgagtatccctgtcaatattt 245
Query: 185 gaatcaatattcaaaaatatttctagaaggtttttgttcgtttgtctttattggatattt 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaatcaatattcaaaaagatttctagaaggtttttgttcgtttgtctttattggatattt 185
Query: 245 atttatatttcaaatgttatcccatttcccagtttccctccctcccagaaacaccctatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atttatatttcaaatgttatcccatttcccagtttccctccctcccagaaacaccctatc 125
Query: 305 aaatcctccctagccctgcttctatgagggtgttcctccacccacccacctactccaacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aaatcctccctagccctgcttctatgagggtgttcctccacccacccacctactccaacc 65
Query: 365 tccccatcctcaattcccctacactggggcatctatcaagccttcagaggaccaatgact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tccccatcctcaattcccctacactggggcatctatcaagccttcagaggaccaatgact 5
Query: 425 tctt 428
||||
Sbjct: 4 tctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_p21.g1 MSMg01no336_p21.g1 CHROMAT_FILE:
MSMg01no336_p21.g1 PHD_FILE: MSMg01no336_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:13 2005
(434 letters)
>mm_chr5_54586446_54587280
Length = 835
Score = 818 bits (423), Expect = 0.0
Identities = 432/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 1 tttatgattccatttaagaccaagggaaccaatgaactccccccc-atttacatttcagt 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tttatgattccatttaagaccaagggaaccaatgaactccccccccatttacatttcagt 260
Query: 60 ggagtctcataagtaatgcatgcgtgcatgctgcttgccttccccactgtcgctgggaca 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagtctcataagtaatgcatgtgtgcatgctgcttgccttccccactgtcgctgggaca 320
Query: 120 gcctttaatacctcatcacatgcacgaccttttccagaggcagaggatagaggagtgttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctttaatacctcatcacatgcacgaccttttccagaggcagaggatagaggagtgttc 380
Query: 180 tcctcagactgctgactttttcttgcttctaccacttgaaacgtcctcagtggccaagga 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 tcctcagactgctgactttttcttgcttctaccacttgaaacttcctcagtggccaagga 440
Query: 240 caggcaatccagaggagccatctctgggatgctttctcttgtccttcccttagggaacct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggcaatccagaggagccatctctgggatgctttctcttgtccttcccttagggaacct 500
Query: 300 ttctggtctgtgactctgccaccacccctgagcaaggcctggaaagtgagctagccagct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctggtctgtgactctgccaccacccctgagcaaggcctggaaagtgagctagccagct 560
Query: 360 ggccgtagcctgaatttctgatgaccattatgctgggtaactgacgctttctttccaatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggccgtagcctgaatttctgatgaccattatgctgggtaactgacgctttctttccaatc 620
Query: 420 tggctttccctaggt 434
|||||||||||||||
Sbjct: 621 tggctttccctaggt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
