CCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAATCCTGTGTACAAGGCTTCATGACTTCATGATCTATTACTCGG
TATTTTTATTGAGATCTTGAGAAAAACCTTATAAAGGTTAGTTATATTTG
CAAAAGAAATGAAAGTCTTGTGAAGTTAGTTATATTTGAAATCTGGGTCC
TTTTAAATACCTTTTCTTTGGAGTAAGTGGTATCTGACAGATAAGAAGCC
CATTGTTGCATCTGATTCGTAGGCGTGGGGAGCCTTGTTGGAGATAAGTG
GTCCTCACCTATTTTGTAAGGAAGACTTGATATCTGTGGCAGTCACAGGG
CTGTAGCACAAGGGTCTGATACCGGCTTCTCTTTCCTGGTTCTCTCAGTC
TCTTCATTAGTTTATGAGAACCCATAATGCACGCTTAGTAGGTGCTGGAG
TTACTTCTTGCCAGAGTAACTAAGAATCCTCTTCTCTTTTAGCCTCCAGT
TAGAAGATTTTCTTTTCTCTCTTCCACCTCCTCACTTTCCTCCAAGAGCT
AGAAAGTTTATTTATTCTAGATTTCTGTGTTTGATACAATGTCTCCACAG
CCTGTTTACAGCTCAGTGGACCCTCTCGCTAACTCTCCGCACTCCAGCGG
CCATCCTTCCTGTTTGCCTGTTCCCGACCTCACCCGTAGTAAGCTTCTTC
TCTTCTCCCCCCCTTTCCTTCCCCCTCTCTTTGTTTCCGGTTCCTTCTGG
CTTTTT

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGTGTTGAGAACTGCTAGGGCAGGAGGG
GCCACACCCCCAAAGCTGCTGCTCAAACAGGAGCCTCAATCTGCCTGCAT
CGTTTTACAGCTTGGCTGCAGGTGAGCAGGGAAGGGCAGAAGGTGGTCAT
GCAAAAGGCAGGGGCCAAGCGTGTGCCGGGGACTGGGAGTGCTGAATGGC
TGCTCATTTGTTACCGCTATTTTGACTCTTTCTCCCCATCAGTTGTAGCA
TCAAAATTCTATACTACAGAACAGGCCACAAGCATAAGAAGCAAGGAGCA
CAGATCGAGGGTGGAGGTGCAGAACCAGTTCTCCGATCGCTCTTCCCCCC
TCAGGGTGATTGTGACTAACGATTCAGCATCTCACTGCACACTCAGGAAA
TGCACTCCGCTAAAGACCCTTTCACGGTGCACAGTGCTGTTGGTCCAGGA
TTCCCAACAACACCCCCCCACACTGGAAAGCATCATAATGACCCCCAGAG
TTTGTAGACTAGGCCTGGACATTCTAAAGGTGTGCAGACAACACTGGTGG
TCCCTTACAGCACAGCGCATGCCCTTGGTCCAGATGAAACTAACTTGCCC
CAAGAATTAAAACAAATCTTGTTGTGGTGGAAAAGAATGGTAAATCCCCG
ACCCCCTCGATGTACACCTGACAACCTTTACTGGGTCTTTTTTTATTTTA
TACCTCAAAAG

Query= MSMg01no337_d07.b1 MSMg01no337_d07.b1 CHROMAT_FILE:
MSMg01no337_d07.b1 PHD_FILE: MSMg01no337_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:30 2005
         (533 letters)



>mm_chr5_111287401_111288333
          Length = 933

 Score =  984 bits (509), Expect = 0.0
 Identities = 524/529 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaatcctgtgtacaaggcttcatgacttcatgatctattactcggtatttttatt 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcctgtgtaaaaggcttcatgacttcatgatctattactcggtatttttatt 264

                                                                       
Query: 65  gagatcttgagaaaaaccttataaaggttagttatatttgcaaaagaaatgaaagtcttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagatcttgagaaaaaccttataaaggttagttatatttgcaaaagaaatgaaagtcttg 324

                                                                       
Query: 125 tgaagttagttatatttgaaatctgggtccttttaaataccttttctttggagtaagtgg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaagttagttatatttgaaatctgggtccttttaaataccttttctttggagtaagtgg 384

                                                                       
Query: 185 tatctgacagataagaagcccattgttgcatctgattcgtaggcgtggggagccttgttg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatctgacagataagaagcccattgttgcatctgattcgtaggcgtggggagccttgttg 444

                                                                       
Query: 245 gagataagtggtcctcacctattttgtaaggaagacttgatatctgtggcagtcacaggg 304
           ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 gagataagtggtcctcacctactttgtaaggaagactcgatatctgtggcagtcacaggg 504

                                                                       
Query: 305 ctgtagcacaagggtctgataccggcttctctttcctggttctctcagtctcttcattag 364
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgtagcacaagggtctgacaccggcttctctttcctggttctctcagtctcttcattag 564

                                                                       
Query: 365 tttatgagaacccataatgcacgcttagtaggtgctggagttacttcttgccagagtaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttatgagaacccataatgcacgcttagtaggtgctggagttacttcttgccagagtaac 624

                                                                       
Query: 425 taagaatcctcttctcttttagcctccagttagaagattttcttttctctcttccacctc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taagaatcctcttctcttttagcctccagttagaagattttcttttctctcttccacctc 684

                                                            
Query: 485 ctcactttcctccaagagctagaaagtttatttattctagatttctgtg 533
           |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcactttcctctaagagctagaaagtttatttattctagatttctgtg 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no337_d07.g1 MSMg01no337_d07.g1 CHROMAT_FILE:
MSMg01no337_d07.g1 PHD_FILE: MSMg01no337_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:31 2005
         (480 letters)



>mm_chr5_111452774_111453655
          Length = 882

 Score =  890 bits (460), Expect = 0.0
 Identities = 476/482 (98%), Gaps = 2/482 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgttgagaactgctagggcaggaggggccacacccccaaagctgctgctcaaacagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agtgttgagaactgctagggcaggaggggccacacccccaaagctgctgctcaaacagga 623

                                                                       
Query: 61  gcctcaatctgcctgcatcgttttacagcttggctgcaggtgagcagggaagggcagaag 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gcctcaatctgcctgcatcgtgttacagcttggctgcaggtgagcagggaagggcagaag 563

                                                                       
Query: 121 gtggtcatgcaaaaggcaggggccaagcgtgtg--ccggggactgggagtgctgaatggc 178
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 562 gtggtcatgcaaaaggcaggggccaagcgtgtgctccggggactgggagtgctgaatggc 503

                                                                       
Query: 179 tgctcatttgttaccgctattttgactctttctccccatcagttgtagcatcaaaattct 238
           ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 502 tgctcatttattaccgctattttgactctttctccccatcagtcgtagcatcaaaattct 443

                                                                       
Query: 239 atactacagaacaggccacaagcataagaagcaaggagcacagatcgagggtggaggtgc 298
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 442 atactacagaacaggccacaagcataagcagcaaggagcacagatcgagggtggaggtgc 383

                                                                       
Query: 299 agaaccagttctccgatcgctcttcccccctcagggtgattgtgactaacgattcagcat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agaaccagttctccgatcgctcttcccccctcagggtgattgtgactaacgattcagcat 323

                                                                       
Query: 359 ctcactgcacactcaggaaatgcactccgctaaagaccctttcacggtgcacagtgctgt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctcactgcacactcaggaaatgcactccgctaaagaccctttcacggtgcacagtgctgt 263

                                                                       
Query: 419 tggtccaggattcccaacaacacccccccacactggaaagcatcataatgacccccagag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggtccaggattcccaacaacacccccccacactggaaagcatcataatgacccccagag 203

             
Query: 479 tt 480
           ||
Sbjct: 202 tt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 882
Length adjustment: 10
Effective length of query: 470
Effective length of database: 872
Effective search space:   409840
Effective search space used:   409840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)