Query= MSMg01no337_i12.b1 MSMg01no337_i12.b1 CHROMAT_FILE:
MSMg01no337_i12.b1 PHD_FILE: MSMg01no337_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:56 2005
(593 letters)
>mm_chr5_68975955_68976948
Length = 994
Score = 1087 bits (562), Expect = 0.0
Identities = 586/594 (98%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 1 cattaaacacttgcacagacactttgtcacttgctatagaattttgagattttgaatatt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cattaaacacttgcacagacactttgtcacttgctatagaattttgaggttttgaatatt 260
Query: 61 tgtaaagcaatgataaattcattagagatctatacagcacaaaaagctttagcactaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaaagcaatgataaattcattagagatctatacagcacaaaaagctttagcactaatt 320
Query: 121 tatttataaaagaatcttctgagctccagaatttgtttttacaattatcataattatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttataaaagaatcttctgagctccagaatttgtttttacaattatcataattatttt 380
Query: 181 ggaattcttcccttcttatgtagtaagtattttaagatttcctacagtcttacatcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaattcttcccttcttatgtagtaagtattttaagatttcctacagtcttacatcagaa 440
Query: 241 ttgatcaatgcatataatcaataatagagtcatcaaggtatgtttagtttttgaacacaa 300
|||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 ttgatcaatgcatagaaacaataatagagtcatcaaagtatgtttagtttttgaacacaa 500
Query: 301 tcatattatataaaaatgtaactaaaacattattaagtatttccattcattcatttgggt 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tcatattatataaaaatgtaactaaaacattattaaatatttccattcattcatttgggt 560
Query: 361 ggataccttggcagcaattatgtataatcttccagatatggtaatttagtgtataccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggataccttggcagcaattatgtataatcttccagatatggtaatttagtgtataccaca 620
Query: 421 tggtgttttatttattcattactaggttgatatgatataaggttatttctgttttactaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtgttttatttattcattactaggttgatatgatataaggttatttctgttttactaa 680
Query: 481 tagaagtgctattacctagataggtgacttgtattaaaaaaaa-taagggggagagagag 539
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 681 tagaagtgctattacctagataggggacttgtattaaaaaaaaataagggggagagagag 740
Query: 540 tatgtgatataaaattaccctaactttcacactaaagggttctttcccaattta 593
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtgatataaaattaccctaactttcacactaaagggttctttcccaattta 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 994
Length adjustment: 10
Effective length of query: 583
Effective length of database: 984
Effective search space: 573672
Effective search space used: 573672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_i12.g1 MSMg01no337_i12.g1 CHROMAT_FILE:
MSMg01no337_i12.g1 PHD_FILE: MSMg01no337_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:57 2005
(445 letters)
>mm_chr5_69067299_69068143
Length = 845
Score = 625 bits (323), Expect = 0.0
Identities = 335/339 (98%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 107 tgccagcttgcatagcaccatctgcgataatagtttgtgcctattatcttatcatattat 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tgccagcttgcatagcaccatctgcgataatagtttgtgcctattatcttatcatattat 786
Query: 167 gtcctgttcagttgatatctctgggaggcctactcttttctgaagagaaatggaggagtg 226
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gtcctgttcagttgatatctatgggaggcctactcttttctgaagagaaatggaggagtg 726
Query: 227 gattggggaaagaggagctgctgtaggggggggggagacaaatcagtggtcagatttaaa 286
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 725 gattggggaaagaggagctgctgta-gggggggtgagacaaatcagtggtcagatttaaa 667
Query: 287 tgtatgagaggagaattaattgtaaaaaattaaatggggctttaataccaagtctaacga 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 666 tgtatgagaggagaattaattgtaaaaaattaaatggggctttaataccaagtctaagga 607
Query: 347 aatacttagataagagaactaacaacatcccatatattcatactcaattttcttgctctt 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aatacttagataagagaactaacaacatcccatatattcatactcaattttcttgctctt 547
Query: 407 tatgcttctgttcttattacagtttattttatagaggaa 445
|||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tatgcttctgttcttattacagtttattttatagaggaa 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
