XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAC
TCACTCACTCCGGTCAGAACTTACCAGGGGAAAGTTCCACCCTCGTTGAT
TGCCTTACGATTCAGCCAAATGGTTCTGTAAGATACACCTCTTCCTCATG
GTGAAGATTTTGTAAAACTCACCACTCCGGACACAGAAATTTCGTTGGTT
TTTATTATGAGCAAATATAAGTTAATGCCAACGCTACTTTAAAGTTATTT
TTTAAAGTGTAAGATTGGAGGAGAGAAGCCAGCTGAACAGCTAGCTAAAA
ATGGTCTTAGATACTTGATTCCTTTTCAACTTAAAAAAAAAGAAACATGA
AGTTATTCCATCGCAAGAAGATGTCAGATAATATTTTCCAACAGCTCAAG
TTAGGCATAGTGTTTTCAGACATTACTGCTGGGTCATCAGCAGGTCCCCG
CTCCCACTGCCTGCTCCAGAATGTATGTGAGTTCTCCCAAAATGCTCGCA
GGATTGCCGGGAGGGGCAGCATGACAGCCTGATCTTCTTTTAATAATCGG
AGACAATGTGACAAAGTGGCACAGCGATGGCTCTCCTGCTTGCATATTTT
TTAAAGACGCTTGTCCTTCATCCTTGTGTTAGACCAGTCACGGCAGTTGT
GCGTTCTGAAAGATGACTGTCCTAAGCCTTAAAACCCAGGGGAGACGGGA
AAGCCGTGTGTATTTTTATAGCCCAGAGGCGATGAAGATATTTTACCCCG
AAACTGTTTCTAC

GTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGAACTCCTCAGCTGGGGAACGGTGGTAATGAA
GTGTTCCCGTAAAACAGACTGTTGAGAAGGATTCAACTGCGTGGATTCAG
AACTCTTCAGCTGGGGAACGGTGGTAATGAAGTGTTCCCGCAACACAGAC
TGTTGAGAAGGATTCAACTGCGTGAATTCAGAACTCTTCAGCTGGGGAAC
AGGGTACCCGTAAGTATAGCTTTACAAGGTACGTCTGGCCTTGAACTTTC
TAACGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGGAAATAGCTTTAC
AAGGTAAGTCTGGTCTTGAACTTTCTAACGAAATTCAAGACAGTCTATCA
GAAGTAAAGTGGGAAATAGCTTTACAAGGTATGTTTGGCCTTGAACTTTC
TCTAGTGTTAGGAGCCCTTTTGTTCCTTTTCACATGTTATCAAGCGGTTA
AGGCAGGGCTGAAAATTCTGGATGAAATTCAGGGCAATCTATCAGAAGTA
AAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGATTCACAAAATAA
GTATACAGGCCTTTCCACGGGTCTTGAACCCGAGGAAAAGTTTAGGTCAG
GTAAGAATACCTGGGGAGAGATTAGACGGGAAGAAAAAAATAAGATCCTT
TATCGGAGGTCTCTAAAAGAAACTATTCTCCTCCCTATAGTACCCCGGGA
GCCAGTTCTTATTATTTG

Query= MSMg01no337_m15.b1 MSMg01no337_m15.b1 CHROMAT_FILE:
MSMg01no337_m15.b1 PHD_FILE: MSMg01no337_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:16 2005
         (598 letters)



>mm_chr5_125202044_125203041
          Length = 998

 Score = 1149 bits (594), Expect = 0.0
 Identities = 597/598 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggtcagaacttaccaggggaaagttccaccctcgttgattgccttacgattcagccaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggtcagaacttaccaggggaaagttccaccctcgttgattgccttacgattcagccaaa 260

                                                                       
Query: 61  tggttctgtaagatacacctcttcctcatggtgaagattttgtaaaactcaccactccgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttctgtaagatacacctcttcctcatggtgaagattttgtaaaactcaccactccgg 320

                                                                       
Query: 121 acacagaaatttcgttggtttttattatgagcaaatataagttaatgccaacgctacttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagaaatttcgttggtttttattatgagcaaatataagttaatgccaacgctacttt 380

                                                                       
Query: 181 aaagttattttttaaagtgtaagattggaggagagaagccagctgaacagctagctaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagttattttttaaagtgtaagattggaggagagaagccagctgaacagctagctaaaa 440

                                                                       
Query: 241 atggtcttagatacttgattccttttcaacttaaaaaaaaagaaacatgaagttattcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggtcttagatacttgattccttttcaacttaaaaaaaaagaaacatgaagttattcca 500

                                                                       
Query: 301 tcgcaagaagatgtcagataatattttccaacagctcaagttaggcatagtgttttcaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcgcaagaagatgtcagataatattttccaacagctcaagttaggcatagtgttttcaga 560

                                                                       
Query: 361 cattactgctgggtcatcagcaggtccccgctcccactgcctgctccagaatgtatgtga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattactgctgggtcatcagcaggtccccgctcccactgcctgctccagaatgtatgtga 620

                                                                       
Query: 421 gttctcccaaaatgctcgcaggattgccgggaggggcagcatgacagcctgatcttcttt 480
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 gttctcccaaaatgctcgcaggattgccgggaggggcagcgtgacagcctgatcttcttt 680

                                                                       
Query: 481 taataatcggagacaatgtgacaaagtggcacagcgatggctctcctgcttgcatatttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taataatcggagacaatgtgacaaagtggcacagcgatggctctcctgcttgcatatttt 740

                                                                     
Query: 541 ttaaagacgcttgtccttcatccttgtgttagaccagtcacggcagttgtgcgttctg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttaaagacgcttgtccttcatccttgtgttagaccagtcacggcagttgtgcgttctg 798


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)