Query= MSMg01no337_n20.b1 MSMg01no337_n20.b1 CHROMAT_FILE:
MSMg01no337_n20.b1 PHD_FILE: MSMg01no337_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:22 2005
(459 letters)
>mm_chr16_3251999_3252859
Length = 861
Score = 594 bits (307), Expect = e-174
Identities = 420/458 (91%), Gaps = 6/458 (1%)
Strand = Plus / Minus
Query: 6 ggaattcttcctgattc-tctttcttatttctaaataaaaggaagaaaaaag-acacatg 63
|||||||||||||| || | |||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 ggaattcttcctgaatcat-tttcttatttctaaataaaaggaagaaaaaagtacacatg 603
Query: 64 catagaaataaagcttcttttgatccttctttttctcctttaaatacatatagaaaaatg 123
|| |||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||| |
Sbjct: 602 cagagaaataaagtttcttttcatccttctttttctcttttaaatacttatagaaaaacg 543
Query: 124 catctttttacactgtctccttatataaatatcttcctaggtagttatgccttaaaaaag 183
|||| ||| |||||||||||| ||||||||||| |||| ||||||||| ||||||||||
Sbjct: 542 catcatttaacactgtctcctaatataaatatcaacctatgtagttatgtcttaaaaaag 483
Query: 184 aatattttaaaaatacactttacattccacttt-aaaacccagtcaactcaaaaaatatt 242
||| |||| |||||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 482 aatctttttaaaatacactttacattccaatttaaaaacccagtcaactcagaaaatatt 423
Query: 243 cctagtattaaaagctacaattctttctgttatcagtaaatcccttatatttttcaatgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctagtattaaaagctacaattctttctgttatcagtaaatcccttatatttttcaatgt 363
Query: 303 attacaataatctcctttcttcctcagactgtctatagaagaacatcttttacattcaag 362
| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 362 actacaataatctcctttcttcctcagacggtctatagaagagcatcttttacattcaag 303
Query: 363 gatatatctt-aaatcacntctagccatgaaccagtttgctaaggatttatctgaagctg 421
|||||| ||| ||| || |||||||||| || |||||||||||||||| ||||| |||
Sbjct: 302 gatata-ctttaaaccagttctagccatggacgtgtttgctaaggatttacctgaacctg 244
Query: 422 ccacattttaataaaaattggactaatgaatttttggc 459
||||||||||||||||||| ||||||||||||||||
Sbjct: 243 tcacattttaataaaaattgttctaatgaatttttggc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 861
Length adjustment: 10
Effective length of query: 449
Effective length of database: 851
Effective search space: 382099
Effective search space used: 382099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_n20.g1 MSMg01no337_n20.g1 CHROMAT_FILE:
MSMg01no337_n20.g1 PHD_FILE: MSMg01no337_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:22 2005
(455 letters)
>mm_chr5_79613577_79614431
Length = 855
Score = 857 bits (443), Expect = 0.0
Identities = 452/455 (99%)
Strand = Plus / Plus
Query: 1 tgcctgactgattcaactcagatagtctggcccaaactcctctccacactgactgattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctgactgattcaactcagatagtctggcccaaactcctctccacactgactgattca 260
Query: 61 tattcacatctctggcttctcactgaatttctctttatggaaaaactgtccctgaattct 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tattcacatctctggcttctcactgaatttctctttttggaaaaactgtccctgaattct 320
Query: 121 atgaactagactgcgctgactgcacttgctgaatgaagtgactggaactgcatgaattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaactagactgcgctgactgcacttgctgaatgaagtgactggaactgcatgaattcc 380
Query: 181 actgaactgcacctaaatgaatgccactgcactgcctgaactcaaatatagaggaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgaactgcacctaaatgaatgccactgcactgcctgaactcaaatatagaggaatttt 440
Query: 241 aatccagcagcatgactgctctagcaagggatcacatcccaaaacgttctaggtctgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatccagcagcatgactgctctagcaagggatcacatcccaaaacgttctaggtctgtgt 500
Query: 301 gataagattggaaagtagacacaccctgaattataataaaatatggctggaatgcagaca 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gataagattggaaagtagacataccctgaattataataaaatatggctggaatgcagaca 560
Query: 361 cataggtcatatgtacctataatccctgataatgaagttaaggtgactttatagaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cataggtcatatgtacctataatccctgataatgaagttaaggtgactttatagaagaag 620
Query: 421 gaagcagcaatgtttgaaattgacatctaattaag 455
||||||||||||||||||| |||||||||||||||
Sbjct: 621 gaagcagcaatgtttgaaagtgacatctaattaag 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
