XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CACCTGATGACTACCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAACA
TCCTCAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCT
CACACCAGTCAGAATGGCTAAGATAAAAAATTCAGATGACAACAGATGCT
TGCGAGGATGTGGAGAAAGAGGGACACTCCTCCAGTGCTGGTGGGTTTGC
AAGCTGGTACAACCACTCTGGAAATCAGTCTGGGGGTTCCTCAGAAAATT
GGACATAGGACTACCGGAAGATCCAGCAATACCTCTCCTAGACATATACC
CAGAAGATGTTCCAACTAATAATAAGGACACATGCTCCACTATGTTCATT
GCAACCTTTACAATAGCCAGAAGCTGGAAAGAACCCAGATGTTCCTCAAC
AGAGGAATGGATACAGAAAATGTGGTACATCTGCACAATGAAGTACTACT
CAGCAATTAAAAACAATGAATTTATGAAATTCTTAGGCAAATGGATGGAT
CTGGAGGATATTATTCTGAGTGAGGTAACCCAATCACAAAAGAACACACA
TGATATGTACTCACTGATAAGCAGATATTAGTCCAGAAACAGAATACCCA
AGGCCCAATTTGCAAAACACATGAAACTCCAGAAGAAGGAAGACCAAAGT
GTGGCTACCTCATTCCTTCTTAGATTGGGAAACAAATACCCATGTAAAGA
G

ATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXANATGCATAAGGCTACGAAGAACATCTCAT
GCAAACCACCATAAACAGGCTGTGATATATCATGCCAAAAAAGTAGAAAA
TAGGAGTTTTACACAAAAATGCATGAAGTTTGGAATCTTTCAGGAATTTT
TAGTAAGTAGGAACAAATGAGTGGTATATGGCAGTAGCAAGTGTCTTTTT
AGACAAATGGCCTTAAGTAGAAAAAGATAACTCAGAATAAAAGAGTTAAA
GAAGAAAATTAATATACTATATACTATGATGCATATATTCTTATGCTTCA
GCAATTTTATAACATTTTGGAGAAGAAATTTTGAAGAACACATAAAACAA
GTACAGAAATTGTGATTGTCATAATCATTTAATAATAAATTATTGGGTTT
TGTTTGTACTTTCATCAATTTATTTATTTATTTATTTATTTATTCCTTTT
ATGTCTTGATCGCAAACACCCTCCCACCTCTCCTCTCTGTCTCACCTCTC
TAGAGGGAATGGGAAGACCCCTCGGGTATAACCTCCCCCTGGAACATCCA
GGCCCAGAAGGACCAAGCACATCCTCACTCACTAATTCCTAACCAGGCAG
TCCATTTAGAGGAAGAGGATCCAATCTCAGGCAACAGAAACAGACCCATC
CCCTACTCCAATTGTTAGGGGAACCATATAAAG

Query= MSMg01no338_k22.g1 MSMg01no338_k22.g1 CHROMAT_FILE:
MSMg01no338_k22.g1 PHD_FILE: MSMg01no338_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:22 2005
         (590 letters)



>mm_chr5_70699909_70700902
          Length = 994

 Score = 1106 bits (572), Expect = 0.0
 Identities = 584/592 (98%), Gaps = 8/592 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   atgcataaggctacgaagaacatctcatgcaaaccaccataaacaggctgtgatatatca 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgcataaggctacgaagaacatctcatgcaaaccaccataaacaggctgtgatatatca 542

                                                                       
Query: 63  tgccaaaaaagtagaaaataggagttttacacaaaaatgcatgaagtttggaatctttca 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgccaaaaaagtagaaaataggagttttacacaaaaatgcatgaagtttggaatctttca 482

                                                                       
Query: 123 ggaatttttagtaagtaggaacaaatgagtggtatatggcagtagcaagtgtctttttag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaatttttagtaagtaggaacaaatgagtggtatatggcagtagcaagtgtctttttag 422

                                                                       
Query: 183 acaaatggccttaagt----agaaaaagataactcagaataaaagagttaaagaagaaaa 238
           ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaatggccttaagtagaaagaaaaagataactcagaataaaagagttaaagaagaaaa 362

                                                                       
Query: 239 ttaatatactatatactatgatgcatatattcttatgcttcagcaattttataacatttt 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaatatactatatactatgatgcatatattcttatgcttcagcaattttataacatttt 302

                                                                       
Query: 299 ggagaagaaattttgaagaacacataaaacaagtacagaaattgtgattgtcataatcat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagaagaaattttgaagaacacataaaacaagtacagaaattgtgattgtcataatcat 242

                                                                       
Query: 359 ttaataataaattattgggttttgtttgtactttcatcaatttatttatttatttattta 418
           |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||
Sbjct: 241 ttaataataaattattgggttttgtttgtactttcatca----atttatttatttattta 186

                                                                       
Query: 419 tttattccttttatgtcttgatcgcaaacaccctcccacctctcctctctgtctcacctc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tttattccttttatgtcttgatcgcaaacaccctcccacctctcctctctgtctcacctc 126

                                                                       
Query: 479 tctagagggaatgggaagacccctcgggtataacctccccctggaacatccaggcccaga 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tctagagggaatgggaagacccctcgggtataacctccccctggaacatccaggcccaga 66

                                                               
Query: 539 aggaccaagcacatcctcactcactaattcctaaccaggcagtccatttaga 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aggaccaagcacatcctcactcactaattcctaaccaggcagtccatttaga 14


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 994
Length adjustment: 10
Effective length of query: 580
Effective length of database: 984
Effective search space:   570720
Effective search space used:   570720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)