ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCANATGCCCCAACCACAGGCAAAAGTATAGCACCCTCATGGTAGAGC
CATAAGCTCCCTTGGTGAGGATACTAGCTAGTTCTTGGTCAACTTCACAC
AAGATAGTCAGCAGAGAAGAGAGAGCTTCTTTTGAGAAAAATACCTCAGT
AAGACCTGACTGGATGGTGCCATTCCGGGTGTGAAGTCCTANTCTCTAAT
AAAAAAGAAGTTGGATGGTCCATCCTTTCGCCACAGCTCCAANATGGGTC
GACTNNNNNTTTTCTTTGGCGGTTTTGGTTCGNAATTCCTAAAGGACGCT
TCCAACTGGGAACGTTAGGGGGGGGGGAGGGGGGGCCTTTAATCCANCTT
TCCAAACCGCTGGACCCCTTTTTGCAAAATTAATATTNNNTTTTNTTTCC
TTCGAAAGGGGACCCTCAAAATAAAACCTCCCTTCCCTTGGGGAAAATTT
AACTCCCATTGGCCCTTTTTCCCAATACTCTAAAAATTGTGGTACTTCCC
CTTTCTCCCCCCTCTTTTTTCCTTTTTTTCCCTCATCGTCCTTCCCCCTT
GGTGGGGGGGAGGGGTTCCCATTAAAAAATACCTATCGGGGGGGGGGCCC
CCTATTCCTCTATCCTCCATTTCTTCTTTTCTGTGTTTCCACCATCCCTC
CCCCTCTTTTATTTTTCCTTCATTCTCCCCCCCTACCCTCCCCCTTCCCT
CCTCCTGGGGCTGCGGGGGGTGGTTG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATGTGGGAATGCGGAATCTATATTTCTCACCATT
CATTAGAAAAAAAAAAGCCTAGTTGTTAATTATATCTCAAGGAAGCAGGA
AATAATAAATCCTAGGATATAAAAAAGTTATACATTTAAAGCAACTAAAA
GAAATGAGTAAAACATTATTATTAAACTAATAAGTATAAATTAGTTCCAT
TAAGTTTTTTTTCACCCCTGGAAATTAAATAGCATATTCACTATCTTCTA
GAAGGATCAATAATAGTATGTTGATCTCGTTGTCAGAATATATTTTGAGA
GTAAAGTGAAAGAAAATCATGGAGGAAAACCCAACACTCGCAAATAGAAT
CTTGAAACAAAACAAAACAAAACAAAACACTTTTCCAAAAGGCTGTAACT
GCTTATTGAACAGATAGCTCTCTAAGGCTGTGGGTTTAGATAGACAGAAG
TTTTTCCTTTCTAAGAGTCAAAGAACAAAGGCTGCTTCAGGAGTCAGCCC
AATCAGTGAGATTTTTTTCAGGGTGTGATGACAATTTGTCTATTTCCTAT
GAATACTGAAAGTAGGTGTGAAACATAGACACTTGTAAGAAGCTACAGCA
AGGACTGCAAAGTAGAGAGAAAGCCACAGTTGCTATTTAATGCTATCTTG
AGCAGTAAGTCCAAGAAAAGAAGTTTGACTGCCCAAGTACTGTAATG

Query= MSMg01no338_m10.g1 MSMg01no338_m10.g1 CHROMAT_FILE:
MSMg01no338_m10.g1 PHD_FILE: MSMg01no338_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:29 2005
         (639 letters)



>mm_chr5_3723579_3724618
          Length = 1040

 Score = 1168 bits (604), Expect = 0.0
 Identities = 630/642 (98%), Gaps = 8/642 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgggaatgcggaatctatatttctcaccattcattagaaaaaaaaaa-gcctagttg 59
           |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 201 atgtgggaatgctgaatctatatttcttaccattcattagaaaaaaaaaaagcctagttg 260

                                                                       
Query: 60  ttaattatatctcaaggaagcaggaaataataaatcctaggatataaaaaagttatacat 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaattatatctcaaggaagcaggaaataataaatcctaggatataaaaaagttatacat 320

                                                                       
Query: 120 ttaaagcaactaaaagaaatgagtaaaacattattattaaactaataagtataaattagt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaagcaactaaaagaaatgagtaaaacattattattaaactaataagtataaattagt 380

                                                                       
Query: 180 tccattaagttttttttcacccctggaaattaaatagcatattcactatcttctagaagg 239
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tccattaagttttttttcacccctggaaattaaatagcacattcactatcttctagaagg 440

                                                                       
Query: 240 atcaataatagtatgttgatctcgttgtcagaatatattttgagagtaaagtgaaagaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaataatagtatgttgatctcgttgtcagaatatattttgagagtaaagtgaaagaaa 500

                                                                       
Query: 300 atcatggaggaaaacccaacactcgcaaatagaatcttgaaacaaaacaaaacaaaacaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 501 atcatggaggaaaacccaacactcgcaaatagaatcttgaaacaaaacaaaacaaaaca- 559

                                                                       
Query: 360 aacacttttccaaaaggctgtaactgcttattgaacagatagctctctaaggctgtgggt 419
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ----ctttttcaaaaggctgtaactgcttattgaacagatagctctctaaggctgtgggt 615

                                                                       
Query: 420 ttagataga--cagaagtttttcctttctaagagtcaaagaacaaaggctgcttcaggag 477
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttagatagagacagaagtttttcctttctaagagtcaaagaacaaaggctgcttcaggag 675

                                                                       
Query: 478 tcagcccaatcagtgagatttttttcagggtgtgatgacaatttgtctatttcctatgaa 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tcagcccaatcagtgagatttttttcagggtgtgatgacaatttgtctatttcctatgaa 735

                                                                       
Query: 538 tactgaaagtaggtgtgaaacatagacacttgtaagaagctacagcaaggactgcaaagt 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tactgaaagtaggtgtgaaacatagacacttgtaagaagctacagcaaggactgcaaagt 795

                                                     
Query: 598 agagagaaagccacagttgctatttaatgctatcttgagcag 639
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 agagagaaagccacagttgctatttaatgctatcttgagcag 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space:   647870
Effective search space used:   647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)