CGCGCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCACCTGACGAATACCGAATGGCAGAGAAGAACCTGAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAGGCTTGTACAACCACGTCTGGCGGTTCCTCAGAAAATT
GGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATC
CAGAAGATGTCCCAACCGGTAAGAAGGATACATGCTCCATTATGTTCATA
GCAGCCTTATTTATAATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTC
AACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACT
ACTCAGCTATTTAAAAGGATGAATTTATGAAATTCCTAGCCAAATGGATG
GACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTC
ACACAATATGCACTCCCTGATAAGTGGATATTAGCCCAAAACTTAGAATA
CCCCAGATATAAGATACAATTAGCTAAAACGCATGAAACTCAAGAAGAAA
GAAGAACCAAGGGTGGACACTGTGCCCCCTTCCTAAAAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXAGAATACTTAGATATCACAGCTGGGAGAAACATCAGCAATGTGTT
TGTGTGAGCTGAGTATTTGTGAGGACAACACAGGACCTTTTGTTATCTGT
AGAAGGGGAAAGGTAGAATGAAAAAAAGAACATTCTAGAAGAAAAAAGTA
GCATAAGTAAGAAGGTACGGAAGTGACAAAGGCCTCTCATGACACGTTTA
GTATGTCTGTTACTAGACATATTGAACAACTCCAGGTCAGATTGGTTGAA
AGACAGACTGGACAACTAACCTTGGGCAAGTAAGTAATTTTTCTCATCTG
AGCCCATGCATGTCACAAAAGATATACTCAATCACTATTCACTTTTTTAA
CATTTAGTTTTCACTGAAAGTAACTAAACATGCCAAAATATTGTCATAAG
GCTTACGTTTAATCATCACATTTAATTACAAAGCATAAAGTTTGGAACCG
TCATCTTGTTCAAATCAGTAGACCACTGTAGTTAAGTAGGAAGAGAATGC
TAGTAACTCCAGACAGTTAAACTCAGTCCAGAACATCTTTTTGCGTGTGT
GGATATTAATAGGCTATGGGTGAACAGGTTAATTTTAACCCCAGCTCAAA
AAGTATTAGGGGGTTTTGAAATTAAACCACACGGCGCCCAAGGAAAAAAA
AGGCAATGGGTTTTATTAGATTAACAAG

Query= MSMg01no339_m08.g1 MSMg01no339_m08.g1 CHROMAT_FILE:
MSMg01no339_m08.g1 PHD_FILE: MSMg01no339_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:41 2005
         (468 letters)



>mm_chr5_13414466_13415333
          Length = 868

 Score =  897 bits (464), Expect = 0.0
 Identities = 467/468 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaatacttagatatcacagctgggagaaacatcagcaatgtgtttgtgtgagctgagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaatacttagatatcacagctgggagaaacatcagcaatgtgtttgtgtgagctgagta 260

                                                                       
Query: 61  tttgtgaggacaacacaggaccttttgttatctgtagaaggggaaaggtagaatgaaaaa 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tttgtgaggacaacacaggaccttttgttatctgtagaaggagaaaggtagaatgaaaaa 320

                                                                       
Query: 121 aagaacattctagaagaaaaaagtagcataagtaagaaggtacggaagtgacaaaggcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaacattctagaagaaaaaagtagcataagtaagaaggtacggaagtgacaaaggcct 380

                                                                       
Query: 181 ctcatgacacgtttagtatgtctgttactagacatattgaacaactccaggtcagattgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcatgacacgtttagtatgtctgttactagacatattgaacaactccaggtcagattgg 440

                                                                       
Query: 241 ttgaaagacagactggacaactaaccttgggcaagtaagtaatttttctcatctgagccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaagacagactggacaactaaccttgggcaagtaagtaatttttctcatctgagccc 500

                                                                       
Query: 301 atgcatgtcacaaaagatatactcaatcactattcacttttttaacatttagttttcact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcatgtcacaaaagatatactcaatcactattcacttttttaacatttagttttcact 560

                                                                       
Query: 361 gaaagtaactaaacatgccaaaatattgtcataaggcttacgtttaatcatcacatttaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaagtaactaaacatgccaaaatattgtcataaggcttacgtttaatcatcacatttaa 620

                                                           
Query: 421 ttacaaagcataaagtttggaaccgtcatcttgttcaaatcagtagac 468
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttacaaagcataaagtttggaaccgtcatcttgttcaaatcagtagac 668


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)