Query= MSMg01no340_l22.b1 MSMg01no340_l22.b1 CHROMAT_FILE:
MSMg01no340_l22.b1 PHD_FILE: MSMg01no340_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:49 2005
(408 letters)
>mm_chr5_74298615_74299423
Length = 809
Score = 561 bits (290), Expect = e-164
Identities = 333/348 (95%), Gaps = 3/348 (0%)
Strand = Plus / Plus
Query: 59 gcaaattgaaagctttctc-ttctttctctttcctcctccctctgctaagggagaaactg 117
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 259 gcaaattgaaagctttctctttctttctctttcctcctccctccgctaagggagaaactg 318
Query: 118 gtcttgtcccagagttggcaatgaaaacaactgtaaaattgaaaagaaatgtggaacagc 177
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 319 gtcttgtcccagagttggcaatgaaaacaactgtaaaactgaaaagaaatgtggaacagc 378
Query: 178 tattttcttgacatcagaaggcctagaggagctatgacctcaagagaaatgaagcaaagc 237
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 379 tattttcttgacatcagaaggcctagaggagctatgaccacaagagaaatgaggcaaagc 438
Query: 238 caagctttagaaggtggagacaggaggatcaggacttcaagatcatccccaactgtagag 297
|||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caagctatgggaggtggaggcaggaggatcaggacttcaagatcatccccaactgtagag 498
Query: 298 caaagttgaggccagtctgagggcatgaggcttcaccacaaagtaacaaaaacaaacaag 357
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 499 caaagttgaggccagtctgagagcatgaggcttcaccacaaagtaacaaaaacaagcaag 558
Query: 358 cagcccagaagtttctgggttgactggggtggaggtgggg--ggggtg 403
|||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 559 cagcccagaagtttctaggttgactggggtgggggtggggtgggggtg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 809
Length adjustment: 9
Effective length of query: 399
Effective length of database: 800
Effective search space: 319200
Effective search space used: 319200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_l22.g1 MSMg01no340_l22.g1 CHROMAT_FILE:
MSMg01no340_l22.g1 PHD_FILE: MSMg01no340_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:49 2005
(421 letters)
>mm_chr5_74464399_74465219
Length = 821
Score = 806 bits (417), Expect = 0.0
Identities = 420/421 (99%)
Strand = Plus / Minus
Query: 1 tttcctttctgggaacctttccctaggcagctgggttgctgttggctagggctttctggc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 tttcctttctgggaacctttccctaggcagctgggttgctgctggctagggctttctggc 562
Query: 61 cacgcccatgtcctggtctcattttacttttcgggttccggcggatgccatctggctaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacgcccatgtcctggtctcattttacttttcgggttccggcggatgccatctggctaga 502
Query: 121 accctggagagaaactttaaagttgactacactcacccttagacccttattcatatcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accctggagagaaactttaaagttgactacactcacccttagacccttattcatatcctc 442
Query: 181 cactagctaatccctaacgcccaaggcttgctggacaccagcagaaacgggcagagggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactagctaatccctaacgcccaaggcttgctggacaccagcagaaacgggcagagggaa 382
Query: 241 accgggaagcgagcacgcccgtgtccccgcggtgtaggtccccagcccagtgcccggtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accgggaagcgagcacgcccgtgtccccgcggtgtaggtccccagcccagtgcccggtac 322
Query: 301 ggtcctgggtccggcggaaaggccgcggtgctgggtttgctcggggctggccttacggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcctgggtccggcggaaaggccgcggtgctgggtttgctcggggctggccttacggtg 262
Query: 361 cagctggcaccgagcgggaccctagggcagaggagcaagaacggcttccagtggggtcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagctggcaccgagcgggaccctagggcagaggagcaagaacggcttccagtggggtcag 202
Query: 421 c 421
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
