Query= MSMg01no341_h01.b1 MSMg01no341_h01.b1 CHROMAT_FILE:
MSMg01no341_h01.b1 PHD_FILE: MSMg01no341_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:42 2005
(447 letters)
>mm_chr5_77410610_77411456
Length = 847
Score = 607 bits (314), Expect = e-178
Identities = 317/318 (99%)
Strand = Plus / Minus
Query: 1 gcactactgaccacactattcccccagatcccaggaacaatcaacaacaacacagaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcactactgaccacactattcccccagatcccaggaacaatcaacaacaacacagaaact 259
Query: 61 tgtgctatttataagttcttgttctcctaagtatcccttcaattgatctgttcccttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgtgctatttataagttcttgttctcctaagtatcccttcaattgatctgttcccttgtt 199
Query: 121 ttttgagacaagattgctccagaagaccctggttgtcctcaaactctctatagacctagc 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 198 ttttgagacaagattgctccagaagaccctggttgtcctgaaactctctatagacctagc 139
Query: 181 tggcttcaaactcagagagatctgcctgcctctgcctcccaaatgctgggattaaaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tggcttcaaactcagagagatctgcctgcctctgcctcccaaatgctgggattaaaggtg 79
Query: 241 tgcgccagcaccgccccattcagttgatctttatgcaagcatatatgtgaatctaaccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tgcgccagcaccgccccattcagttgatctttatgcaagcatatatgtgaatctaaccta 19
Query: 301 aatatttctttaaaattc 318
||||||||||||||||||
Sbjct: 18 aatatttctttaaaattc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_h01.g1 MSMg01no341_h01.g1 CHROMAT_FILE:
MSMg01no341_h01.g1 PHD_FILE: MSMg01no341_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:42 2005
(160 letters)
>mm_chr5_77271202_77271762
Length = 561
Score = 294 bits (152), Expect = 2e-84
Identities = 155/156 (99%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 1 agcccatgaaatactgtatttttatagggcgtcaagaaattctttgaagggtggatactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcccatgaaatactgtatttttatagggcgtcaagaaattctttgaagggtggatactg 260
Query: 61 gcctgttgccttcagtgatacctgctctgtaacatttaccacataccactgccactttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctgttgccttcagtgatacctgctctgtaacatttaccacataccactgccactttaa 320
Query: 121 aaagtgggttt-aagtgttgtacagtgcatgtaatg 155
||||||||||| ||||||||||||||||||||||||
Sbjct: 321 aaagtgggttttaagtgttgtacagtgcatgtaatg 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 561
Length adjustment: 8
Effective length of query: 152
Effective length of database: 553
Effective search space: 84056
Effective search space used: 84056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
