XXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAATTCTTTGTTCT
TTCCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTTTCTGAAGTCCACC
TTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGG
ATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTTGTCTTATTGA
CGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTG
TCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTT
TTCCCCTGTGTCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAA
GTTTAAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTAGATTTG
ACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACATGA
TAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTCTTCC
ACTGGATGGTTTTAGCTTCCTTGTCGAATATAAGTGAACATAAGTGTGTG
GTTTCATTTCTGGGGCTTCCATTCTATTTCCTTGGGCAACTTGGCTGGCC
CCAAACAAGAACATGCAGTTTTTTATCACACCTGTTCTGTTGTATAATTT
TTACGCCCTCCTTGGGGTTTCTCCCCTAATTTCTTTTTTCTTTTGTAGTA
AATTTTGTTTCCCTAACTTTTTTTTTTTTTTTATTAAACTTTTCTATTTT
N

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAATGTGCTGAATAACTTCTTGTGGCAAGAGAGCATG
AACATGGATGTAGAGGTCATCTTTTAAGAATGATGTAGAGGGCTGGAGAG
ATGGCTCAGAGGTTAAGATCACTGGCTGCTCATCCAGAGGTCCTGAGTTC
AATTCCCAGCAACCACATGGTGGTTCATAACCATCTATAAGGAGATTTGG
TACCCTCTTCTGGCCTTCGGGCATACATGCAGGCAGACCACTCATACATA
ATAAATAACTAATCTTTTTTTTAAAAAAACATAAATGACAAACAAATAGT
AGCTGATGTAACTACTTTCATCAAAAGCTTTGGATAATTGTGTTGTAGCT
TCAGGAACTGGAGTCTTGTAGGCATTTTAATGGGAAAGTAGAAAAGAGAT
ATTTTACCTATTGAATAATGGAATAAAAACTTCCTAGTGACATTCTGGGA
AGGCTTGCAGAAGACAGGATTTTATGGGCCCAGTCGACATATGGTATAGA
AGATTTATTCTCCCAACATCCCTCCTATGCATGGGTTTAAAGATAAAAAT
ACCCAAAATTCTATATCCATCTTTTTATCCCCCCTGGGCTAAAATAAAAT
AATTAATTTAGGCGGGGTGGCTTAAGAGAAAAGAGAATTGTGAGTTTATT
TTCCCCTCTTTCTTGTCTTTTCCCCTCATTCTTCTCTTTTCATTGTCG

Query= MSMg01no342_k22.g1 MSMg01no342_k22.g1 CHROMAT_FILE:
MSMg01no342_k22.g1 PHD_FILE: MSMg01no342_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:16 2005
         (441 letters)



>mm_chr5_43032836_43033676
          Length = 841

 Score =  783 bits (405), Expect = 0.0
 Identities = 432/441 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgtgctgaataacttcttgtggcaagagagcatgaacatggatgtagaggtcatcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgtgctgaataacttcttgtggcaagagagcatgaacatggatgtagaggtcatcttt 260

                                                                       
Query: 61  taagaatgatgtagagggctggagagatggctcagaggttaagatcactggctgctcatc 120
           |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagaatgctgtagagggatggagagatggctcagaggttaagatcactggctgctcatc 320

                                                                       
Query: 121 cagaggtcctgagttcaattcccagcaaccacatggtggttcataaccatctataaggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaggtcctgagttcaattcccagcaaccacatggtggttcataaccatctataaggag 380

                                                                       
Query: 181 atttggtaccctcttctggccttcgggcatacatgcaggcagaccactcatacataataa 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 atttggtaccctcttctggccttcaggcatacatgcaggcagaccactcatacataataa 440

                                                                       
Query: 241 ataactaatcttttttttaaaaaaacataaatgacaaacaaatagtagctgatgtaacta 300
           |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 441 ataactaatcctttttttaaaaaaacagaagtgacaaacaaatagtagctgatgtaacta 500

                                                                       
Query: 301 ctttcatcaaaagctttggataattgtgttgtagcttcaggaactggagtcttgtaggca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttcatcaaaagctttggataattgtgttgtagcttcaggaactggagtcttgtaggca 560

                                                                       
Query: 361 ttttaatgggaaagtagaaaagagatattttacctattgaataatggaataaaaacttcc 420
           ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaataggaaaataggaaagagatattttacctattgaataatggaataaaaacttcc 620

                                
Query: 421 tagtgacattctgggaaggct 441
           |||||||||||||||||||||
Sbjct: 621 tagtgacattctgggaaggct 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)