XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTG
AGATTGCCAGGAAGAAGCCAAGGTGCTTTGGGTTCCTGCTTGTGATAACT
TGAGTTCAGTCCCTGGGACCCACATGGTAGAAGAATCATTTCTGAAGAGT
TATCCTCTGACCTCCATATGAGCTCTATGGTATGTATGTGTGTGTCTGTG
TGCATGTGTATACAACAATATGAACTAATCAGTACCTCCAGAGCTCCTGA
CTCTAGCTGCATATGTAGCAGAAGATGGTCTAGTCGGCCATCACTGGGAA
GAGAGGCCCCTTGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAACA
CCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGCAGGGCAAGGGGAG
GATATAGGGAACTTTTGGGATAGCATTTGAAATGTATATAAAGAAAAAAA
AATATATATATATAAAGTAATGTTAAAAAAACTAAAAAAAATTTTTTTTC
ACAGCCTGGAGAGAACAGGAAAGCAATTGCCCAAACATATATTCTAAATT
AACCTAGACAGAGTGTCCATTATGAAATTATAACAATAATAATAATAACA
ATAATAAAAAACCAGATCTGAACCCTCCCTCTCAGAACTACAATAGTATT
GTATCTGTATTGGCGATAACTGTAAAACTTTGTCCTGCAGAAACTGAGAA
CCTGATTGGAATAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCCCG
AAATTCTGTTTTGCTCTGTATCTCTCTCTCTCCTATCCTCCCTCCTTCTC
TCCTTCTTCCCCACCTCCTCACCCACCTCTGTGTGTATATTACAGCTCAG
CTTAATGATCAGAAATAATGTCACCAGAATTTTGAAAGCATCACTGGCTT
TGTAGTGGGAAGAAGAAAATTGGAGAGGACAGCAGTGAACAGAGTGATAA
CTCCACTCAGAAAACCATTTGTCTAAAAACAGATGATGAACAACAGTACT
TTATGGCTTAAAGAGGAGAGTGATGTATCAAAACCGCCAATGGAGAAATT
CACAGACAAATAGGCAGACACCCCTAGGTGAGGCATCAAACAGAAAATGT
GGAGAATTCTAGGGCTAGGATTATTCTAGGATTTTAGATTATGAACTAGA
TAAATGATTGTAGCAAGCGAACAAATAAGTATTTAAATCACAGTATAGGG
CCTACTGCAAGAATAATGAAGAAACTCAGAGTAACATCTTAAGAGTAGAA
GTCACCACATAGGTAAGTTACCTGCAGTGACAGATTGAGATCAATGGTGA
CAGGTGATAGATATATTCTAATCCATGCACTCTAAGGAAACAAGTCAACA
TCCCATGATCTAACACAAGAAAAAGTGCTTTCAGCTATACCTGACAAC

Query= MSMg01no345_k13.g1 MSMg01no345_k13.g1 CHROMAT_FILE:
MSMg01no345_k13.g1 PHD_FILE: MSMg01no345_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:09 2005
         (579 letters)



>mm_chr5_16087398_16088376
          Length = 979

 Score = 1112 bits (575), Expect = 0.0
 Identities = 578/579 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgttttgctctgtatctctctctctcctatcctccctccttctctccttcttccccacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ctgttttgctctgtatctctctctctcctatcctccctccttctctccttcttccccacc 792

                                                                       
Query: 61  tcctcacccacctctgtgtgtatattacagctcagcttaatgatcagaaataatgtcacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tcctcacccacctctgtgtgtatattacagctcagcttaatgatcagaaataatgtcacc 732

                                                                       
Query: 121 agaattttgaaagcatcactggctttgtagtgggaagaagaaaattggagaggacagcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agaattttgaaagcatcactggctttgtagtgggaagaagaaaattggagaggacagcag 672

                                                                       
Query: 181 tgaacagagtgataactccactcagaaaaccatttgtctaaaaacagatgatgaacaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgaacagagtgataactccactcagaaaaccatttgtctaaaaacagatgatgaacaaca 612

                                                                       
Query: 241 gtactttatggcttaaagaggagagtgatgtatcaaaaccgccaatggagaaattcacag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gtactttatggcttaaagaggagagtgatgtatcaaaaccgccaatggagaaattcacag 552

                                                                       
Query: 301 acaaataggcagacacccctaggtgaggcatcaaacagaaaatgtggagaattctagggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acaaataggcagacacccctaggtgaggcatcaaacagaaaatgtggagaattctagggc 492

                                                                       
Query: 361 taggattattctaggattttagattatgaactagataaatgattgtagcaagcgaacaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taggattattctaggattttagattatgaactagataaatgattgtagcaagcgaacaaa 432

                                                                       
Query: 421 taagtatttaaatcacagtatagggcctactgcaagaataatgaagaaactcagagtaac 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 431 taagtatttaaatcacagtatagggcctactgcaagagtaatgaagaaactcagagtaac 372

                                                                       
Query: 481 atcttaagagtagaagtcaccacataggtaagttacctgcagtgacagattgagatcaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atcttaagagtagaagtcaccacataggtaagttacctgcagtgacagattgagatcaat 312

                                                  
Query: 541 ggtgacaggtgatagatatattctaatccatgcactcta 579
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggtgacaggtgatagatatattctaatccatgcactcta 273


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)