XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACCT
GAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTT
AATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACAC
AAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGT
GAATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCT
TGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGACA
TAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAA
GATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGC
CTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAG
AGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAATACTACTCA
GCTATTAAAAAGAATAAATTTATGAAATTCCTAGCCAAATGGATGGACCT
GGAGGGCATCATCCTGAGTGAGGTAACACATTCCCAAAAAAACTCACACA
ATATGTACTCACTGATTAGTGGATATTTACCCCCAACCCTAGGAAACCCA
GAATTAACAATATTTCTGTTAAACCCTGGAAACCCCCCAAGAATGATTAA
TGAAGTGGGGGGGCCTATTCTCTCCCTTAAAATTGTGGAAAAAAAACCCT
TGGGAGGGGTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTAAACCCAAATAACAACAACAACAGGAGAACAC
AAAGGATATAGTGACTCCTAGAATTGGTATGTATGTACTTGAGCAGCATG
TAGCTTTTAAGACTGATAAACAAAACAGAACAGAACAAAAAACAAAACAA
CAAGAAAAGCAAGACAAACCTTAAATTTTATAGACTTGAAACATGTGTGT
GTTTATTGAACATGAGTTGACTTCCTGAAATGCACACCGTGTTTGACACT
CCCAGCTTTGTGATAAAACGAAGCTATGGCTACAAGAAGAGGCTTCTTTT
TGCCAGTCCACAACCACAGATTCAGTCTCTGATCCTGTATACTATGATTA
ATTCAGATATCTTCTGCCTTCAAGTCCCTGCCATGTTTGAGTTCCTATTC
TGAGTTCCTTCAGTGATGAACAGTGATATGAAAGTGTAAGCCAAATAAAC
TCTTTCTGCTCCAACTCGCTTTCTAGTTGAGGTGTTTCAATGCAGTTCTC
AATACCCTATCTAAGACATTGTTAGAGATTAGACTGGTAAAAACAAATAA
CATCAACAAAAACCTAAATAANACATTCCTGTATTTTTTTTTCTAACAAC
TTTTTGACCCAGTTGCTTTTGCGTGTGGCTCACTTTAACCTACTTTAAAG
GAGAAATCCCCTTTTTGCGAAAATTTTTCAGCCTTTTGCCACCCCCGCCC

Query= MSMg01no346_a18.g1 MSMg01no346_a18.g1 CHROMAT_FILE:
MSMg01no346_a18.g1 PHD_FILE: MSMg01no346_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:38 2005
         (501 letters)



>mm_chr5_58031549_58032447
          Length = 899

 Score =  911 bits (471), Expect = 0.0
 Identities = 493/501 (98%), Gaps = 2/501 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctaaacccaaataacaacaacaacaggagaacacaaaggatatagtgactcctagaatt 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 696 tctaaacccaaataacaacaacaacaggagaacacaaaggatatggtgactcctagaatt 637

                                                                       
Query: 61  ggtatgtatgtacttgagcagcatgtagcttttaagactgataaacaaaacagaacagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggtatgtatgtacttgagcagcatgtagcttttaagactgataaacaaaacagaacagaa 577

                                                                       
Query: 121 caaaaaacaaaacaacaagaaaagcaagacaaaccttaaattttatagacttgaaacatg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 576 caaaaaacaaaacaacaagaaaagcaagacaaaccttaaattttatagacttgaaac--g 519

                                                                       
Query: 181 tgtgtgtttattgaacatgagttgacttcctgaaatgcacaccgtgtttgacactcccag 240
           |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 518 tgtgtgtttattgaacatgagttgtcttcctgaaacgcacaccgtgtttgacactcccag 459

                                                                       
Query: 241 ctttgtgataaaacgaagctatggctacaagaagaggcttctttttgccagtccacaacc 300
           ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 458 ctttgtgatgaaacgaagctttggctacaagaagaggcttctttttgcaagtccacaacc 399

                                                                       
Query: 301 acagattcagtctctgatcctgtatactatgattaattcagatatcttctgccttcaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acagattcagtctctgatcctgtatactatgattaattcagatatcttctgccttcaagt 339

                                                                       
Query: 361 ccctgccatgtttgagttcctattctgagttccttcagtgatgaacagtgatatgaaagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccctgccatgtttgagttcctattctgagttccttcagtgatgaacagtgatatgaaagt 279

                                                                       
Query: 421 gtaagccaaataaactctttctgctccaactcgctttctagttgaggtgtttcaatgcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtaagccaaataaactctttctgctccaactcgctttctagttgaggtgtttcaatgcag 219

                                
Query: 481 ttctcaataccctatctaaga 501
           |||||||||||||||||||||
Sbjct: 218 ttctcaataccctatctaaga 198


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 899
Length adjustment: 10
Effective length of query: 491
Effective length of database: 889
Effective search space:   436499
Effective search space used:   436499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)