XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGT
AATTTACTACTTATTCAGCAACATTCAGAATTGCCTCTAGTATTATAAGA
GAGATAGTGAAAGAAATCAGGCATTACTCTCTACAACATAGAGTTGGAAA
TCTCAGGGCAAGCGTAGCAAAGTAAGGTTAGAATTCTTATTATAGTTATG
TATGGCAGACTACATTACTTAATAGTAGAAAGTTCCCCACATAATCACTT
AGAATAAAAGCCAAGTCACTTCCATATACAGGAATTTACAATGGTTTAGG
AAGAAGATTGGGCTGTGGTTTAAGGAAGAACTAGAGTATTGCATTATTCA
TGAGAATGTTGGTGAAATCAGAACTCCCTAATTAGAACTATTGCTTGGGT
GTGAAAGCCCTTGCTCCGAGAGTGTAAAAACCTCACACCTGGCTTCAAAG
AATATAGCTGACCTTAGATAGAGCTGACTTTGTCTCAGTTGTTTTATTGC
CTACTTGCTGTCAGTCTTTATGTATGCATTCCTCTGTTTTGTGTAAGAGT
CATTAAGCATCCGGTAACCTCATTTGTACCTTGCTGATGTGTCACCTAAC
TTCCCTGTTTTCTTCTGTATTAAAAATCTGATACTCACTTTGAGAAATTA
CATTCAGATACAGCACTCTCTCTGTGTCCGTGCTTGTTTGTCATCTGCAC
CACCTCCTTGCTTGGCTGAGTACCAAAATCCTGGT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATCTTCCACTCTCTGGACTGCATACACTGCAC
AAATATAGGTGTTGTCAGGCAAATCTAATTTATGGAGCAGTGTGGTGTTC
TGAGGGCTGCAAAGAAAATCAAGGTTTTAGAAAGCAGTGTCTGAGATAAA
GAATGATACTAGACTGTAATAGTACACTACATTGGCCAGGGCAGAGCAAA
ATAGACTGGTTCTTGAAAAATAATATGCAGAAAAATGTAGGCTACATACT
GGATGCTGAGGGCTGTACTGATGGAAATAGCTTTCATGTAGAGCAGGATG
TTTGTAGCCACCACCTACTTTTATCCATAGATGTGATCCTAGAGCCACAA
TGGCCACATGGGAGAAGCCAGGGGTTATATGGACATAGTACAAGCAGGTA
TCATATGCTGTATCTTTTAGGTTGACATTAAACTCAACAGTTCTCCCAGG
AGCATCTTCTGTAACTTAAGGAGAGACATTCTAGTGGTTGCTACTTAGCT
CTCTATATCACAATATTCTACATACCCCCAGCCCCTTGTAGTCAGGGTAC
CAAAGTGAAATTCTTGCAGGTCAGCAGAACTCTTTCCTGTTATATCCGGA
CCTGGATTTTGATGAAGAATGGCTTGGATAACTCGACCCCCTGAAATTAA
TTTCCCCCCCCTTATTCTGGGGGTTAAACCCCCTCTTTTTTGGGGGGGCC
CN

Query= MSMg01no348_i17.g1 MSMg01no348_i17.g1 CHROMAT_FILE:
MSMg01no348_i17.g1 PHD_FILE: MSMg01no348_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:52 2005
         (471 letters)



>mm_chr5_27040627_27041497
          Length = 871

 Score =  874 bits (452), Expect = 0.0
 Identities = 467/472 (98%), Gaps = 2/472 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcttccactctctggactgcatacactgcacaaatataggtgttgtcaggcaaatctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcttccactctctggactgcatacactgcacaaatataggtgttgtcaggcaaatctaa 260

                                                                       
Query: 61  tttatggagcagtgtggtgttctgagggctgcaaagaaaatcaaggttttagaaagcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatggagcagtgtggtgttctgagggctgcaaagaaaatcaaggttttagaaagcagt 320

                                                                       
Query: 121 gtctgagataaagaatgatactagactgtaatagtacactacattggccagggcagagca 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgagataaagaatgatacaagactgtaatagtacactacattggccagggcagagca 380

                                                                       
Query: 181 aaatagactggttcttgaaaaataatatgcagaaaaatgtaggctacatactggatgctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatagactggttcttgaaaaataatatgcagaaaaatgtaggctacatactggatgctg 440

                                                                       
Query: 241 agggctgtactgatggaaatagctttcatgtagagcaggatgtttgtagccaccacctac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggctgtactgatggaaatagctttcatgtagagcaggatgtttgtagccaccacctac 500

                                                                       
Query: 301 ttttatccatagatgtgatcctagagccacaatggccacatgggagaagccaggggttat 360
           |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 ttttatccatagatttgatcctagagctacaatggccacatgggagaagccaggggttat 560

                                                                       
Query: 361 atggaca-tagtacaagcaggtatcatatgctgtatcttttaggttgacattaaactcaa 419
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgga-agtagtacaagcaggtatcatatgctgtatcttttaggttgacattaaactcaa 619

                                                               
Query: 420 cagttctcccaggagcatcttctgtaacttaaggagagacattctagtggtt 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagttctcccaggagcatcttctgtaacttaaggagagacattctagtggtt 671


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space:   396921
Effective search space used:   396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)