XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
GCTTAATTTGTCAGCCTTGGATACAGTTCCTTTTACCCATTGAGCCCACT
CTCCAAGACCCTGGAATTTTCTGCTTGTCATATGATGTAGACTCATGTAA
TGTTTTGCTGAAGCATATTTATGAGATGTCTGGATGAGGCAACACCTGTG
AGATGACACATGATGTTTGGAAAGAGTATAAGTGGGACTCAAGGGACAGT
GACAAGATGCTTGCAGTATTGTTTGCATATTACCTACTAAAGGACATCTT
GCTTCTTTCCATGTTTCAGAATTTATGAATGGAGCTTTTGCAAACATTTG
TGTGTAGGTTGTGTGTGGACATAAATACTCAGCTCTCTTAAATAACTCTC
AAAGAGTGTAAGTCCTGGACTGTAAAGCAAGAATATGTATAGTTTCATAA
GAAACCACAAAACTTTCCGAAATCACTGAACAGCTACTGGTGCATCTGCA
CCAGCACAAATCAAGAACTTTTTCTTTTTAGCATCTTCAGTTTTTTCTCT
TTGTGATAGTGTTTTAGTAAGCAGTCCAAGCTGTCTTTAAACTCCATATC
CCCTGCCTCAGCTGCCCAACTGCTGTGATTTCAGGTACCTTTTACAAAGT
GAATGATTGTACTGAGTGGTTTTATATGTCAACTTGATAAAAGCTGGAGT
TATCACAGAGAACGGAGACATCCCTTGAGGAAA

ATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTAATACCCACATAAAACCTGGCTAT
TGTCATACGTACCTGTAACCCCAAGTTTGGAGTGTGGGAACAGGTTTTGG
AAACTCACTGGCTAGCCTGTCCCAAATATCAAGCTTTAGGTTCATTTAGA
GTCCCTGTCCCTCCAAACAAGGTTGAGAATGATAGAGGAAAATACCAAAG
ATCCTCCTCTTGCCCCCAAATGCACACACACGTGCACTTACCACACCACA
CACACACACACACACACACACACACTCTCACACACACACACACACACAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTAAA
TATTTTAAGATTATTATTTTTGTATACGTTGTTTAATCCCCAAATCATGG
AAAGACATACCTGTCTTTTCAAATATCAGCCACTTGTTTCTGACCAAAAG
ATTCAACATTTTAGTATTTTTTAAATATAGTCTATTACCCTACTGTATCT
ATAGGAGTCATGTTTCTTTTGCAATGTTTTTTTAGCAGTTATCTATCTGA
GCTCCACTTTACAGATTAAAAAACAGAGAATGAGAAAGTTAGAAATCATT
TTGTCAGGGCTAATTTTTAGTATTTTAAGAAACACACATTTTAAAATCCT
ATACACATGCTTAGCAATACATGAGTCCTAATTTGAAGGGAGGTAAAATA
TTTAGGGAACA

Query= MSMg01no349_h13.g1 MSMg01no349_h13.g1 CHROMAT_FILE:
MSMg01no349_h13.g1 PHD_FILE: MSMg01no349_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:05 2005
         (583 letters)



>mm_chr5_71981663_71982645
          Length = 983

 Score =  804 bits (416), Expect = 0.0
 Identities = 457/482 (94%), Gaps = 20/482 (4%)
 Strand = Plus / Minus

                                                                       
Query: 103 tatcaagctttaggttcatttagagtccctgtccctccaaacaaggttgagaatgataga 162
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tatcaagctttaggttcatttagagtccctgtccctccaaacaaggttgagaatgataga 924

                                                                       
Query: 163 ggaaaataccaaagatcctcctcttgcccccaaatgcacacacacgtgcacttaccacac 222
           |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 923 ggaaaataccaaagatcctcctctcgtccccaaatgcacacacacgtgcacctaccacac 864

                                                                       
Query: 223 cacacacacacacacacacacacacacactctcacacacacacacacacacagagagaga 282
           ||||||||||||||                  ||||||||||||||||| ||||||||||
Sbjct: 863 cacacacacacaca------------------cacacacacacacacacgcagagagaga 822

                                                                       
Query: 283 gagagagagagagagagagagaga-gagagagagagagaagtaaatattttaagattatt 341
           |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 821 gagagagagagagagagagaga-atgagagagagagagaagtaaatattttaagattatt 763

                                                                       
Query: 342 atttttgtatacgttgtttaatccccaaatcatggaaagacatacctgtcttttcaaata 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atttttgtatacgttgtttaatccccaaatcatggaaagacatacctgtcttttcaaata 703

                                                                       
Query: 402 tcagccacttgtttctgaccaaaagattcaacattttagtattttttaaatatagtctat 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tcagccacttgtttctgaccaaaagattcaacattttagtattttttaaatatagtctat 643

                                                                       
Query: 462 taccctactgtatctataggagtcatgtttcttttgcaatgtttttttagcagttatcta 521
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 taccctactgtatctataggagtcatgtttcttttgcaatgtttttttagcagttatcta 583

                                                                       
Query: 522 tctgagctccactttacagattaaaaaacagagaatgagaaagttagaaatcattttgtc 581
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 582 tctgagctccactttacagattaaaaaacagagaatgagaaaattagaaatcattttgtc 523

             
Query: 582 ag 583
           ||
Sbjct: 522 ag 521


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)