Query= MSMg01no349_l14.b1 MSMg01no349_l14.b1 CHROMAT_FILE:
MSMg01no349_l14.b1 PHD_FILE: MSMg01no349_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:25 2005
(605 letters)
>mm_chr5_127510985_127511989
Length = 1005
Score = 1116 bits (577), Expect = 0.0
Identities = 595/601 (99%)
Strand = Plus / Plus
Query: 5 gaattccaccataatcccaggcacaggctgagtgatggatgcgatggatgctgaatgata 64
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaccataaccccaggcacaggctgagtgatggatgcgatggatgctgaatgata 264
Query: 65 tgtgactgagtgaaccgcagtgcactctgggaaacccggaaggagatggctatcatgaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgactgagtgaaccgcagtgcactctgggaaacccggaaggagatggctatcatgaaa 324
Query: 125 aatgatgtttttgcctataattcaatatccaggttagttatagtgggaatcaaacctgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatgatgtttttgcctataattcaatatccaggttagttatagtgggaatcaaacctgaa 384
Query: 185 acgtgtgagcagaagtgccttaggcttcagctcggacctcagcaaagtagaaaataaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acgtgtgagcagaagtgccttaggcttcagctcggacctcagcaaagtagaaaataaact 444
Query: 245 caaccaattagaatcgaccttacatggtaaaactagccactccccaatgggactggctta 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 caaccaattagaatcgaccttacatggtaaaactagccactcccctatgggactggctta 504
Query: 305 gtagctaccagaccagtcatacaattttttgattgttcttatccatttgtccatcacatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtagctaccagaccagtcatacaattttttgattgttcttatccatttgtccatcacatg 564
Query: 365 gctacctttgaggcctaattgtcaaggcagagagtctctggaccggtgttctctaataca 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctacctttgaggccttattgtcaaggcagagagtctctggaccggtgttctctaataca 624
Query: 425 taaattttttcttctttttcaattttctgtatctttacttttctcgttcatgtttatctt 484
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 taaattttttcttctttttcaattctctgtatctttacttttctcgttcatgtttatctt 684
Query: 485 attgaaaactcatagaatataatctggtcatagtttcccctgcccccgtctcctcctagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 attgaaaactcatagaatataatctggtcatagtttcccctgcccccgtctcctcctagg 744
Query: 545 tcctccccacctcctcaccaagccaacttcttgccttctttctttgtcttcagaacacag 604
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttctccccacctcctcaccaagccaacttcttgccttctttctttgtcttcagaacacag 804
Query: 605 a 605
|
Sbjct: 805 a 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_l14.g1 MSMg01no349_l14.g1 CHROMAT_FILE:
MSMg01no349_l14.g1 PHD_FILE: MSMg01no349_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:25 2005
(482 letters)
>mm_chr5_127710829_127711710
Length = 882
Score = 743 bits (384), Expect = 0.0
Identities = 409/426 (96%), Gaps = 14/426 (3%)
Strand = Plus / Minus
Query: 1 agatgtgcagagcgaagcagcaggaaaactaagtctagaataggtgggtggagccagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agatgtgcagagcgaagcagcaggaaaactaagtctagaataggtgggtggagccagcta 744
Query: 61 atataggtgggtggagccagctatgggtgggtggagccagcagctgagtccagaatccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atataggtgggtggagccagctatgggtgggtggagccagcagctgagtccagaatccaa 684
Query: 121 gagaatggtgtcttccctcctctccaagggaaaaagagaatgggccaagagacaggg--- 177
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 683 gagaatggtgtcttccctcttctccaagggaaaaagagaatgggccaagagacaggggtt 624
Query: 178 -----------gtttaagaatgcatacagcccatgttggggttatcattcacactggggt 226
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcacttcctctgtttaagaatgcatacagcccatgttggggttatcattcacactggggt 564
Query: 227 ttctgtgacctaacagaagtaccatggtttaggaaagggttattgtgatttcagatggtc 286
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 563 ttctgtgacctaacagaagtaccatggcataggaaagggttattgtgatttcagatggtc 504
Query: 287 tagcctgtggtgaattggcttcattccctgggacaagggacaaagatccccgtggtgata 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tagcctgtggtgaattggcttcattccctgggacaagggacaaagatccccgtggtgata 444
Query: 347 gaagtatgtggcagaggaggctgtttgttgacagactaaggccccaaaaagtgacttcca 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaagtatgtggcagaggaggctgtttgttgacagactaaggccccaaaaagtgacttcca 384
Query: 407 gatctt 412
||||||
Sbjct: 383 gatctt 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
