TTTNCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCTCTATTGTCTCGTGTGTTAGGGGCCTTATATCAGCTA
GTGTGTGCTGCCTGTTAGATGGTCCAGTGTTTGAGAGATCTCAGAGGTCC
AGATTAATTGAGACTGCTGATCCTCCTACAGGATCACCCTTCTCCTCAGC
TTCTTTCAGCCTTCTTTAATTCAACAACAGGGGTCAGCTGCTTGGTTGGG
TGCAAATAACTGCATCTGACTCTTTCTGCTGCTTGTTGGGTCTTTGGAAG
TGCAGTCATGCCAGGTCCTTTTTTGTGTATTGTTCCATAGCTTCAGTGAT
AGTGTCAGGCCTTGGGAACCACCCCTTGAGCTGGATCTCAATTTGGGCTG
TCACTGGGCCTTCTTTTCCCAAGGCTCCTCTCCATTTTCATTCCTGTAAT
TCTTTTAGACAGGAACAATTATGGGTCAGAGTTGTGACTGTGGGATGGCC
CCCCTCTCCCTCATTTTTGACTGTGGGATGGCAACCCCATCCCTCTGCTG
GAGGCGGACAGAACAAGTTCCCTCTCCCGACTGTAGGACATTTCATTTAA
GGTCCCTCCCTTTGAGCCCTGTAAGTTTCTAACCTCTCAGGTTCTTTGGT
GCTTTCTGGATGGTTCTTCAGTCTCCTTATCTTCCAAGTGTTGCCTGCTT
CCTTCCCCCCCTATTCACCTCACTTTCCTTGAATTTATGTCCCTTAT

TTTTTTTTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCCTCTCATTTAA
TCTATGCCATTCTTGTGTCTATTTCATGTTATTTGACTTTCCTTCCCTAA
TCAGATTATGTTCTTTGGGACTATTTCCCTGTGTTATTTTACATATAAAA
ATTTACCATTCTTCTCTAGGGGGAAGATTGATGCTTGTTTCCATAAATCA
GCAAATACTGTAAGTGAAAATAGGATTCCCAGAATATCTTCATAGATACT
AAGTTGAACTTTGTCTCATTTGATACTCTGATATGCACTGCCCTGACCTC
GAGCCATTGGGTCATCCCATTTACAAAATGCACTCTGCATCTGATTTTCA
GGTTACTTCATGTGCACCTTTACCATAGCGTCTATGAAAGGACCTTAGAT
AAAATGAACCAAGTATGGCTTTTGCAACTGAACCTTATTAAATTTTAAAG
TATATCCATAAGTATATAAGTTCCTATTATGGATCAACGCTCAAAAAATA
AATATTCACCAATACAGCTCATTTTACAGAATCACGGACTCAGAGTTATT
TAAGCAAAATAAGCTTATCACTTACTACCACTTAAAGTTAAATTATTTCT
AAAGGGAGAAGCGTGTATCAATACTTAAAAAAACCCTCCGGGTTTGTTTT
GCTTTAACATCCCCAAACCTTGTCAGGAAACTTTTCTACCCCTCCCCTTC
CTT

Query= MSMg01no350_g06.g1 MSMg01no350_g06.g1 CHROMAT_FILE:
MSMg01no350_g06.g1 PHD_FILE: MSMg01no350_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:18 2005
         (456 letters)



>mm_chr5_49535680_49536535
          Length = 856

 Score =  851 bits (440), Expect = 0.0
 Identities = 452/456 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctcctctcatttaatctatgccattcttgtgtctatttcatgttatttgactttccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctctcatttaatctatgccattcttgtgtctatttcatgttatttgactttccttc 260

                                                                       
Query: 61  cctaatcagattatgttctttgggactatttccctgtgttattttacatataaaaattta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 cctaatcagattatgttctttgggactatttccctgtgttattttacatataacaattta 320

                                                                       
Query: 121 ccattcttctctagggggaagattgatgcttgtttccataaatcagcaaatactgtaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccattcttctctagggggaagattgatgcttgtttccataaatcagcaaatactgtaagt 380

                                                                       
Query: 181 gaaaataggattcccagaatatcttcatagatactaagttgaactttgtctcatttgata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaataggattcccagaatatcttcatagatactaagttgaactttgtctcatttgata 440

                                                                       
Query: 241 ctctgatatgcactgccctgacctcgagccattgggtcatcccatttacaaaatgcactc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctgatatgcactgccctgacctcgagccattgggtcatcccatttacaaaatgcactc 500

                                                                       
Query: 301 tgcatctgattttcaggttacttcatgtgcacctttaccatagcgtctatgaaaggacct 360
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcatctgattttgagattacttcatgtgcacctttaccatagcgtctatgaaaggacct 560

                                                                       
Query: 361 tagataaaatgaaccaagtatggcttttgcaactgaaccttattaaattttaaagtatat 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagatgaaatgaaccaagtatggcttttgcaactgaaccttattaaattttaaagtatat 620

                                               
Query: 421 ccataagtatataagttcctattatggatcaacgct 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccataagtatataagttcctattatggatcaacgct 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)