Query= MSMg01no351_c23.b1 MSMg01no351_c23.b1 CHROMAT_FILE:
MSMg01no351_c23.b1 PHD_FILE: MSMg01no351_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:22 2005
(475 letters)
>mm_chr5_24440943_24441815
Length = 873
Score = 853 bits (441), Expect = 0.0
Identities = 463/471 (98%), Gaps = 2/471 (0%)
Strand = Plus / Minus
Query: 5 gaattccttcagctctcgatcaggcctttgcctcactcccagcacttagcaaagcattaa 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaattccttcagctcaggatcaggcctttgcctcactcccagcacttagcaaagcattaa 614
Query: 65 cagaagctgatgagttgtcgttggtacaacagcgacacaaaccataacaccagcattaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cagaagctgatgagttgtcgttggtacaacagcgacacaaaccataacaccagcattaat 554
Query: 125 agtgttgccttaacgatgttgtggaaatgagccatggcggtgatggaaaagtttgggaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agtgttgccttaacgatgttgtggaaatgagccatggcggtgatggaaaagtttgggaca 494
Query: 185 agccttctctgcagtcccctgagcactcgggcatgcctggttaatgagtggccacccact 244
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 493 agccttctctgcagtcccctgagcaatcgggcatgcctggttaatgagtggccacccact 434
Query: 245 cccctctccctagctacaagagacggccctgtaacccacattttcctctttctgctgctt 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 433 cccctctccctagctacaagagacagccctgtaacccacattttcctctttctgctgctt 374
Query: 305 ggcaggggaccctcacattgccatgtgagatcctcaagactgtgcggcctcgcttaggca 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggcaggggaccctcacatcgccatgtgagatcctcaagactgtgcggcctcgcttaggca 314
Query: 365 taactacaggagagagagagagagttgtgcagactggaaatgggggcaggtggctctgta 424
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 taactacag--gagagagagagagttgtgcagactggaaatgggggcaggtggctctgta 256
Query: 425 gacgcctcctgaggaaccgtctccctctgagatttcttcctctgctacagg 475
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 255 gacgcctcctgaggaaccgtcttcctctgagatttcttcctctgctacagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 873
Length adjustment: 10
Effective length of query: 465
Effective length of database: 863
Effective search space: 401295
Effective search space used: 401295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_c23.g1 MSMg01no351_c23.g1 CHROMAT_FILE:
MSMg01no351_c23.g1 PHD_FILE: MSMg01no351_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:22 2005
(407 letters)
>mm_chr5_24252752_24253558
Length = 807
Score = 733 bits (379), Expect = 0.0
Identities = 400/407 (98%)
Strand = Plus / Plus
Query: 1 agagcctcgcacatggtagggcaagtgctcagccactagctacaccctcagccatgaagc 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagcctcacacatggtagggtaagtgctcagccactagctacaccctcagccatgaagc 260
Query: 61 tggattttaaaacatgtctcgtctcacaggttatgttaaaacctctaccgaggtttctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggattttaaaacatgtctcgtctcacaggttatgttaaaacctctaccgaggtttctag 320
Query: 121 agggaaaaggacacttaggggttagctctgctctgaaggctttccagccaaggagtggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggaaaaggacacttaggggttagctctgctctgaaggctttccagccaaggagtggcc 380
Query: 181 aagcaagacacagctggagatggggcagagggaagccagggaaaggaggggacagagact 240
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aagcaggacacagctggagatggggcagagggaagccagggaaaggagtggacagagact 440
Query: 241 agtgcatcgccctggtatgggctgaggagtagggagaggcacaccacagccatggctagg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgcatcaccctggtatgggctgaggagtagggagaggcacaccacagccatggctagg 500
Query: 301 cattagtatgggcttcaaagggaaagttttcccctgtggtctgaccaggcctgataaaca 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcagtatgggcttcaaagggaaagttttcccctgtggtctgaccaggcctgataaaca 560
Query: 361 atgccttcagatccctgatcagcaaggggtctgaggaacacggagat 407
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 atgccttcagatccctgaccagcaaggggtctgaggaacacggagat 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
