Query= MSMg01no351_o24.b1 MSMg01no351_o24.b1 CHROMAT_FILE:
MSMg01no351_o24.b1 PHD_FILE: MSMg01no351_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:18 2005
(106 letters)
>mm_chr5_41922632_41923137
Length = 506
Score = 190 bits (98), Expect = 3e-53
Identities = 104/106 (98%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 1 caaatggagttgtatgttctatttatttacattttttttcctgcaagtgtctgggctgtg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 305 caaatggagttgtatgttctatttatttaca-tttttttcctgcaagtgtctgggctgtg 247
Query: 61 catagatcaactgtagttgaacttgcctccc-aagattctaatgtt 105
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 246 catagatcaactgtagttgaacttgcctcccaaagattctaatgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 506
Length adjustment: 8
Effective length of query: 98
Effective length of database: 498
Effective search space: 48804
Effective search space used: 48804
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no351_o24.g1 MSMg01no351_o24.g1 CHROMAT_FILE:
MSMg01no351_o24.g1 PHD_FILE: MSMg01no351_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:18 2005
(442 letters)
>mm_chr5_41807878_41808719
Length = 842
Score = 855 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 1 tgtagtaggcttaaatttccctaatagaaagaaagagggacatgcattcttacctgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtagtaggcttaaatttccctaatagaaagaaagagggacatgcattcttacctgaaat 260
Query: 61 acccactactacaccctcctgtctactagctgctcatgatcattggaagagttacagtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccactactacaccctcctgtctactagctgctcatgatcattggaagagttacagtat 320
Query: 121 agggaagtagaaggctagctgcaggtgaagcttcagcaatacagctgttgcagaacactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggaagtagaaggctagctgcaggtgaagcttcagcaatacagctgttgcagaacactg 380
Query: 181 gtctgggatgaacagatgttttgtttttcctgactccctgaaataacccagtagacacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgggatgaacagatgttttgtttttcctgactccctgaaataacccagtagacacat 440
Query: 241 tacaaatctcaggaggcagagcaggtactgtgaccaaaaactgttgaagagcgctaaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacaaatctcaggaggcagagcaggtactgtgaccaaaaactgttgaagagcgctaaggc 500
Query: 301 tctttcagcctcacatagcactgtctggatggtagaagggagaaccacaggtcaggtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctttcagcctcacatagcactgtctggatggtagaagggagaaccacaggtcaggtgat 560
Query: 361 ttaaggctttcatcttgcttctccccaaatatcatctcttgttccttcattgcacatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaggctttcatcttgcttctccccaaatatcatctcttgttccttcattgcacatttg 620
Query: 421 accaaattcaaaacaggaaaac 442
||||||||||||||||||||||
Sbjct: 621 accaaattcaaaacaggaaaac 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
