CCCCTCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAAGCCCAGGGTCAGCTCAAGGACTGCTTAGGACATT
GGAACACTGGTGGAAGCTAATCTAACTTAGCTATATGTCAAAATCAATCC
TTAGAGCCACTTATAATAAAGCAATATTGAAGGAAAGCACCCAGATCCAT
TCACCAACTAACGCACGGACAAGTTTGGAGCATTCGTGCTATGGGATGCC
AAGATTCCAGGAGACTAAGTTTCCATGAAATTCTTTGCCTCAGAACTGCG
TCCAAGCTTTTTGGTCTCATGCAGTTACCACTGGAGTGGGTGTGGCATGT
AAGAGTTAGAGGCAAGACTGAAGGAGCTGAAGGGGACTGTAACCCCATAG
GAAGAACAACACTGTCAAATAACTCAGACCCTTAAGAGCTCCCAGAGACT
GAGCCAAAATCCAAGGAATATGCATGGGCTGGTTCGTAGCCCGAGGCACA
TGTGTAGCAGAGGACTGCCTTGTAGTGGGAGAGGATGAACTTAATCCTGT
GGAAACTTGATTCCCCAGGGAAGAGGGAAGCTGGTGGGGGTGAAGTGGGT
GTGGAANAAATAAGTTNNNTTTATTTNAAAATAATTTTTTAAAATAAATG
GTCTTAAATTATTTAAATTTATTTTTTATTAATATAATATTCATATCAAT
TTTTTTTGTGTTTTTTTTAACTTTATGGCGGATCCCGTTTATTTCCTTCT
TTTC

NNNNCCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAATTCCCTTCATGCT
ATTCAGTTGTCAACACACACTATCTTTAGTTAGTCTTCTATAAAAGCCAG
TTGGATTAAATCTCTTCCCTTGATTTTGTCATATAAAGTTTTCTATATTC
TTTGCACTCCTTCAGTAGAGTGGCCATGTCAAGTGACAGAACTCAACTTT
GGAATATAACCATAAGACCAAAAAAACTTCCTTTTATATAATTTATGCAA
CCTACAGTAATCAACAATAGAAATTTACCTGAAACAGAAAGAAAGATTAT
TTTTAAGTCCATCTTGGACATACACATCTATCTAGCATACACTGCCTTTA
TTCTCAGTTTTGACATTTCTCTGAAGAATAGCTCAATATATGTTTTCCTG
TTTGCTCCTTTATTGTGTTACCCATGGTATTCATCGTCTATGTAGAGTAA
CAATCAAAGCTCTTCAATGTGTTTACCTCCTCATACTCCACCCACTCTTA
GCTCATTCACGTACTTTGCCTTTTCTATGCTAGAAATGTTCTCACCACTG
TTGAATTCCATGTTCTTCTAAACTGAATGTGGTATCGCTTCCTTCTGCTA
ACCTCAAAAACTTTTTTGAAAAAATTATTTTAGCTTTAAAGGGGGGTTAC
CTTAATGAATAATATTACCTTCCCCCATTCCCTAGCAATTTTGAAAATTG
GAAAATAATATCCTTATTCCCCGGC

Query= MSMg01no353_a12.g1 MSMg01no353_a12.g1 CHROMAT_FILE:
MSMg01no353_a12.g1 PHD_FILE: MSMg01no353_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:47 2005
         (455 letters)



>mm_chr5_18898675_18899527
          Length = 853

 Score =  843 bits (436), Expect = 0.0
 Identities = 450/456 (98%), Gaps = 4/456 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attaattcccttcatgctattcagttgtcaacacacactatctttagttagtcttctata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaattcccttcatgctattcagttgtcaacacacactatctttagttagtcttctata 260

                                                                       
Query: 61  aaagccagttggattaaatctcttcccttgattttgtcatataaagttttctatattctt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aaagccagttggattaaatctcttcccttgattttgtcatataaagttttctgtattctt 320

                                                                       
Query: 121 tgcactccttcagtagagtggccatgtcaagtgacagaactcaactttggaatataacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcactccttcagtagagtggccatgtcaagtgacagaactcaactttggaatataacca 380

                                                                       
Query: 181 taagaccaaaaaaacttccttttatataatttatgcaacctacagtaatcaacaatagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagaccaaaaaaacttccttttatataatttatgcaacctacagtaatcaacaatagaa 440

                                                                       
Query: 241 atttacctgaaacagaaagaaagattattttt-aagtccatcttggacatacacatctat 299
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 atttacctgaaacagaaagaaagattattttttaagtccatcttggacatacacatctat 500

                                                                       
Query: 300 ctagcatacactgcctttattctcagttttgacatttctctgaagaatagctcaatatat 359
           ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 501 ctagcatacactgcctttattctcagttttgacatttctctgaa---tagctcaatatat 557

                                                                       
Query: 360 gttttcctgtttgctcctttattgtgttacccatggtattcatcgtctatgtagagtaac 419
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 558 gttttcctgtttgctcctttattgtgtcacccatggtattcatcgtctatgtagagtaac 617

                                               
Query: 420 aatcaaagctcttcaatgtgtttacctcctcatact 455
           ||||||||||||||||||||||||||||||||||||
Sbjct: 618 aatcaaagctcttcaatgtgtttacctcctcatact 653


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 853
Length adjustment: 10
Effective length of query: 445
Effective length of database: 843
Effective search space:   375135
Effective search space used:   375135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)