NNNCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAATAAAGTCTTCAGTCATTGATGACAATAAGTTAAACA
ACCCTAATATCTAGGACGATGTAGTTTATTTAAAACACATTTTCAATAAG
TTAACATACATAGAATATTCTTTTTTTGTTTGTTTGTTTGTTTTTCGAGA
CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACC
AGCCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCGGAGTACTG
GGATTAAAGGTGTGTGCCATATTCTTTTAAAATGAAAAATACACATGTTT
CCCACTAATATTCAAGGTTAAAGTTAGAATATATTCTGGAGGATTAACAT
GTACATTGTGGAGTTTAGAAAGGACATTGAAGGCTAGAAGGAAGGCTCTG
TGGTCAAGAGCACGTGTTCCTTTTTTCAGAGCATCCATGTTTGATTCCCA
GAACTCACACAGAAGCTACGAAGCACACTTAAATCTAGATCTAGATGATC
CTTCACAATTTTCTGGACTCCTTGACAACTGCACACACATGCAGAATGGA
CACATTTAGACTAAATTGGCATATATATTTTTTAAACTGACAATTATTCA
CAAATGATTTCATACCCAAAAAAATGGAAATTGGGCATTACCTACATATG
CGCAGAGATACNCAGACTTCTAACTAGNAC

NCCCCTACGATGATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA
ATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGA
AATGCAAATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGT
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAA
AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACT
CTGGAAATCCGTCTGGCGGTTCCTCATAAAATTGGACATAGTACTACCGG
AGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACT
GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCATTATTTATAAT
AGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATAC
AGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAG
AATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCAT
CCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTACTTCA
CTGATAAGTGGATATTAGCCCCCAACCTAGGATATCCATGATATAATATA
TAATTTGCTTATCACATGAAACCTCT

Query= MSMg01no354_c10.b1 MSMg01no354_c10.b1 CHROMAT_FILE:
MSMg01no354_c10.b1 PHD_FILE: MSMg01no354_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:13 2005
         (534 letters)



>mm_chr5_83471928_83472861
          Length = 934

 Score =  967 bits (500), Expect = 0.0
 Identities = 526/540 (97%), Gaps = 9/540 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaataaagtcttcagtcattgatgacaataagttaaacaaccctaatatctagg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ggaattcaataaagtcttcagtcattgatgacaataagttaaacaaccctaatatctagg 793

                                                                       
Query: 64  acgatgtagtttatttaaaacacattttcaataagttaacatacatagaatattctttt- 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 792 acgatgtagtttatttaaaacacattttcaataagttaacatacatagaatattcttttt 733

                                                                       
Query: 123 --------tttgtttgtttgtttgtttttcgagacagggtttctctgtgtagccctggct 174
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tttgtttgtttgtttgtttgtttgtttttcgagacagggtttctctgtgtagccctggct 673

                                                                       
Query: 175 gtcctggaactcactttgtagaccagcctggcctcaaactcagaaatccacctgcctctg 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtcctggaactcactttgtagaccagcctggcctcaaactcagaaatccacctgcctctg 613

                                                                       
Query: 235 cctccggagtactgggattaaaggtgtgtgccatattcttttaaaatgaaaaatacacat 294
           ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 612 cctcccgagtactgggattaacggcgtgtgccatattcttttaaaatgaaaaatacacat 553

                                                                       
Query: 295 gtttcccactaatattcaaggttaaagttagaatatattctggaggattaacatgtacat 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 552 gtttcccactaatattcaaggttaaagttagaatatattctggaggattaatatgtacat 493

                                                                       
Query: 355 tgtggagtttagaaaggacattgaaggctagaaggaaggctctgtggtcaagagcacgtg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgtggagtttagaaaggacattgaaggctagaaggaaggctctgtggtcaagagcacgtg 433

                                                                       
Query: 415 ttccttttttcagagcatccatgtttgattcccagaactcacacagaagctacgaagcac 474
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 432 ttccttttttcagagcatccatgtttgattcccagaactcacacagaagctacgaagcgc 373

                                                                       
Query: 475 acttaaatctagatctagatgatccttcacaattttctggactccttgacaactgcacac 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acttaaatctagatctagatgatccttcacaattttctggactccttgacaactgcacac 313


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space:   484176
Effective search space used:   484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)