TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCATCCCCTTCACCCACAGAGAAACCAGTAAAAACTAAAGTTTTGTAT
ACTTATGATCCCAGTGCTCAGAAGGGAGAGACAGAGAGATTCCATGGCAA
TCAGTGGCTACAAGCCCAGCACTCCCTGCAAATCTGCAAACTCTTGCTTA
TGAGATTTTGTCTCAAAAAATAAATAAGTAAATAAAACCCACAAAACAAA
GAATATAAAAACACAATACTACCATCACCATTACCACAAACAACAAGAAG
AAGAACAACAACAAGAACAGTATTTTGTTCTCCTGAAAATCAGCACATAA
TGTTTTCTTCTGTTCTCCACAGCAGCATACACATTGTATTCATATATGTA
CAAGGATTAGTACAAACAACATTAATCTCTTAATTCTTTAGATAAAGATG
CATGTAATGAAAGCTGAAAAGTTTTATATTTCTACTATGTTTTCCACAAT
AGTATTTTGATGAAAAGAGATATGACCATTTTATAATCCTTGCAGGTACA
ATATTGACTTTTATTCATGAGGTTTTGTCTGATGCATGTTGCAAATTATT
ATTCTTGTGCATGAACTTATGACAGGGGGTTGTTACAGTGAAATCCCACT
TTGAAATGATGAAGTGACATGATTTTTCGTTTGGGCCTGTGTTAATAACA
ATTCTGTTGCTGCGATAAAACTTCAGACACTGATTAGA

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTTGGTTCCAAGAATAAGAAAAAGA
GAAAAAGGGAGAAAAACACACACATACATACACACACACACACACACACA
CACTTAGTTGATAAAGCAAGTTTACACATATGCTTACATATAAACACACA
CACACACACATACAAGCATGTGTATACACACATTCATACATTGTGTGGAT
GGAGCAAAGCTAGCAATCTAGCCTGTTTCTACAGTTTTCACAAATATACA
TATATACACAAATACATCTTTACTGGATGGAAAAACTCCAATAAGTTGAA
TCCAACAACTTTATTTTTTCTGTTAGCCTTTTGATAAACGAAGTTTTCTT
TGTAAGAAGATTACCTCATAGCCACAAGTTATATATTCTCTAAAAACAGT
CACCACAAAAATACATTCTTCAAAAACAGAATAAAATCATTACACAAAAG
GAAATTACAGCAGTATTATTGATTATATATTATTCTTTCAAAACTTATAT
CTAACTAAATAGTTCCCATCGATCTTTGTCTCCACAAATTCAACATAACT
CCAGAGCAATAATTCTTTTGTCATGAGTTAACAAAATTTGATTAAACCAG
TATATAGTAGCAAGACTTTCCTTACACTTACCTGGCGGCAATCTATACTA
CCGAGAAACAGATCATCATCTTACTTATGTTNAGGGCTTGTATGTTTTN

Query= MSMg01no357_c03.b1 MSMg01no357_c03.b1 CHROMAT_FILE:
MSMg01no357_c03.b1 PHD_FILE: MSMg01no357_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:03 2005
         (505 letters)



>mm_chr5_60475482_60476386
          Length = 905

 Score =  930 bits (481), Expect = 0.0
 Identities = 499/505 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccacagagaaaccagtaaaaactaaagttttgtatacttatgatcccagtgctcagaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ccacagagaaaccagtaaaaactaaagttttgtatacttatgatcccagtgctcagaagg 804

                                                                       
Query: 61  gagagacagagagattccatggcaatcagtggctacaagcccagcactccctgcaaatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gagagacagagagattccatggcaatcagtggctacaagcccagcactccctgcaaatct 744

                                                                       
Query: 121 gcaaactcttgcttatgagattttgtctcaaaaaataaataagtaaataaaacccacaaa 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gcaaactcttgcttatgagactttgtctcaaaaaataaataagtaaataaaacccacaaa 684

                                                                       
Query: 181 acaaagaatataaaaacacaatactaccatcaccattaccacaaacaacaagaagaagaa 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acaaagaaaataaaaacacaatactaccatcaccattaccacaaacaacaagaagaagaa 624

                                                                       
Query: 241 caacaacaagaacagtattttgttctcctgaaaatcagcacataatgttttcttctgttc 300
           ||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caacaacaataacagtacaatgttctcctgaaaatcagcacataatgttttcttctgttc 564

                                                                       
Query: 301 tccacagcagcatacacattgtattcatatatgtacaaggattagtacaaacaacattaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tccacagcagcatacacattgtattcatatatgtacaaggattagtacaaacaacattaa 504

                                                                       
Query: 361 tctcttaattctttagataaagatgcatgtaatgaaagctgaaaagttttatatttctac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tctcttaattctttagataaagatgcatgtaatgaaagctgaaaagttttatatttctac 444

                                                                       
Query: 421 tatgttttccacaatagtattttgatgaaaagagatatgaccattttataatccttgcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatgttttccacaatagtattttgatgaaaagagatatgaccattttataatccttgcag 384

                                    
Query: 481 gtacaatattgacttttattcatga 505
           |||||||||||||||||||||||||
Sbjct: 383 gtacaatattgacttttattcatga 359


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)