CCTAATTTTCNNCCCCTTNTCAACTCCTATACGNAGAGGATCCGCGGAAT
TCTCTGTTTATCTCTATACCTCATTTTTAATCGGATGTTTTGGGGGTTTT
GACATTTAGTTTATTTAATTCTTCATATAGTTTTGCATATTAAACTTCGG
TTTGAATATGGGTTGTAAAANATGTTTTCAAATTTTGTGTCTGTAGGTGG
GCTGTGGGGCGTGGGGNAGGAGTTGGGGGTGGGGGGGAGGGAGGAGGGGG
AGGATNCCCCTTTTTANAATTTGTTAATCTTAATGCCTGTTTTAAANTTT
TCTGTTTCAAAAATTTTTCCCTGGTCCCATGGGTTTTATTGCCTTTTCCA
ATTTTTTTTTTTTTTAGNTTCACGGGATCTGGGTTTTTTTTGGGAAATTA
AAAATTCCTTTTGGAATTTAAATTTTCTTCCCNAAAAAAAAAACCCCCCC
ACTTTATGTTTTTTTTTTTTTCTTCNCCCCTCTTTTTTTTTTTCACCCCC
ACCCCCGGCTAATAAAAACTTTTTTTTTTTTTCTCTCCCCGGTCTTTTTT
TTTTTTTTTTTTTTTTCAAAAAATATCCTTCCTCACCCCCTTTTNCCTTC
CTTTTTTTTTTCCTTCCCTCTTTTTCNNNCTTTNTTTCTTTCCCCCCTCC
TTCTTTTTTTTTTNCTTATACCCCCCCNTCCTTTTTTTTCTTCTATATTT
TCCTTTCTCCCCCCCTCCCCTTTTTTCNCCCCCCCTTTCTTCCCTCTTCC
TTTCTTTTTTTCTTCCTCCTTTTTCCTTTTCTTCCTTCCTTCTTTTTCTT
TCCTTTCTTTCCTCTTCTTTATTATCATTTGTTAGGAAAGTG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATACCTGACTTTGGACCCCTAGC
ACCCAGGTAACAAGCTAGGTGCAGTGGGACATGTTTTTCATGCCAGTGCT
AGGGATACAGATAGGAATACAGATATAGTGCTAGGGAGACAAACAGGTCA
TTGGAACTTTTTGGCTAGTCTAGTGGAATAAATGAACTTCATGTTCATTG
AGAGGCCCTGTTTCAAAAAAATAATGTCAAGAACAGTAAAGATACCAGCT
ATAGATATACACATTTACATATGTGAACATGCAGATACTATATATGTGCC
ATAAATGTGTATGTACACACACACAAAGAATGTTAAATTTAAAATATATT
TTCTTTTACATCTACCTTATTTCAATATTGTTTTCTTAATGTAAGTACTT
TAATATATATATATATATATATATATATATATATATATTGGGCTGAAATA
AAGATAATTTATGCTAGAATATCTAACATANAGATCTGGGCATTTATATT
ATTTTTGACNAGAGTGACAAACTGTGGGGCCCCTGCCTCTGATTGTTGTT
GTTGCACACTGGCGATCTCACGGTGAGGAGACTCTGGGGATCAGGGGCTC
CAGCGGTAGGCATATGTCCCGTTTAAAAGACAAGGGGGAATGTGGCATGG
GAAAATTGAACTTTTGGAACATAAGAAGTACCCTTCTGGTCTTCCTA

Query= MSMg01no357_f07.g1 MSMg01no357_f07.g1 CHROMAT_FILE:
MSMg01no357_f07.g1 PHD_FILE: MSMg01no357_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:18 2005
         (469 letters)



>mm_chr5_17656324_17657194
          Length = 871

 Score =  658 bits (340), Expect = 0.0
 Identities = 421/471 (89%), Gaps = 38/471 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   atacctgactttggacccctagcacccaggtaacaagctaggtgcagtgggacatgtttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 213 atacctgactttggacccctagcacccaggtaacaagctaggtgcagtgggacatgcctt 272

                                                                       
Query: 61  tcatgccagtgctagggatacagataggaatacagatatagtgctagggagacaaacagg 120
           |||||||||||||||||            |||||||||||||||||||||||||||||||
Sbjct: 273 tcatgccagtgctaggg------------atacagatatagtgctagggagacaaacagg 320

                                                                       
Query: 121 tcattggaactttttggctagtctagtggaataaatgaacttcatgttcattgagaggcc 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tcattggaactttttggctagtctagtggaataaatgagcttcatgttcattgagaggcc 380

                                                                       
Query: 181 ctgtttcaaaaaaataatgtcaagaacagtaaagataccagctatagatatacacattta 240
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 ctgtttcaaaaaaataaggtcaagaacagtaaagataccagctatagatatacatattta 440

                                                                       
Query: 241 catatgtgaacatgcagatactatatatgtgccataaatgtgtatgtacacacacaca-- 298
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  
Sbjct: 441 catatgtgaacatgcagatactatatatgtgccataaatgtatatgtacacacacacaca 500

                                                                       
Query: 299 aagaatgttaaatttaaaatatattttcttttacatctaccttatttcaatattgttttc 358
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 aagaatattaaatttaaaatatattttcttttgcatctaccttatttcaatattgttttc 560

                                                                       
Query: 359 ttaatgtaagtactttaatatatatatatatatatatatatatatatatatattgggctg 418
           |||||||||||||||||| |                       |||||||||||| || |
Sbjct: 561 ttaatgtaagtactttaa-a-----------------------atatatatattgtgccg 596

                                                              
Query: 419 aaataaagataatttatgctagaatatctaacatanagatctgggcattta 469
           ||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 597 aaataaagataatttatgccagaatatctaacataaagatctgggcattta 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 871
Length adjustment: 10
Effective length of query: 459
Effective length of database: 861
Effective search space:   395199
Effective search space used:   395199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)