Query= MSMg01no358_g15.b1 MSMg01no358_g15.b1 CHROMAT_FILE:
MSMg01no358_g15.b1 PHD_FILE: MSMg01no358_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:40 2005
(522 letters)
>mm_chr5_113643195_113644116
Length = 922
Score = 971 bits (502), Expect = 0.0
Identities = 514/518 (99%)
Strand = Plus / Minus
Query: 5 gaattctgtgaactgtaactggcagatggagtgggtagcgtagggtggggaccacagcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaattctgtgaactgtaactggcagatggagtgggtagcgtagggtggggaccacagcag 663
Query: 65 atgtccaatgttatagccccataggcattgtccttagggcgtggtgtgggagcagtgcag 124
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 662 atgtccaatgttatagccccataggcattgtccttagcgcatggtgtgggagcagtgcag 603
Query: 125 actgggacttcaccccttcctggcctgcacactgggctccttcatgagcccggctgatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 actgggacttcaccccttcctggcctgcacactgggctccttcatgagcccggctgatca 543
Query: 185 ccatctctgaggatgcttcctgtccctgctgaggcctggccagcatccaagttctaaccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccatctctgaggatgcttcctgtccctgctgaggcctggccagcatccaagttctaaccg 483
Query: 245 ctggaccgtcaggaggtggcccatgtaagatgagctcccgagaaccgtctacctcctccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctggaccgtcaggaggtggcccatgtaagatgagctcccgagaaccgtctacctcctccc 423
Query: 305 ctggctgcctgcagaagcagcttccggaggactggctgggctggccgttctcgtgccatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctggctgcctgcagaagcagcttccggaggactggctgggctggccgttctcgtgccatg 363
Query: 365 gaggactggaagggcagagagaggagagggtggcagggagccacggggcagggtggatga 424
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagaactggaagggcagagagaggagagggtggcagggagccacggggcagggtggatga 303
Query: 425 tggagccgggttctccgaggtgagttgggggccagggtatctgcaggggaatgacatggt 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tggagccgggttctcagaggtgagttgggggccagggtatctgcaggggaatgacatggt 243
Query: 485 gctacgtttttgtgtgaccttggatgggggcattgtga 522
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gctacgtttttgtgtgaccttggatgggggcattgtga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_g15.g1 MSMg01no358_g15.g1 CHROMAT_FILE:
MSMg01no358_g15.g1 PHD_FILE: MSMg01no358_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:40 2005
(415 letters)
>mm_chr5_113595690_113596502
Length = 813
Score = 772 bits (399), Expect = 0.0
Identities = 411/415 (99%), Gaps = 2/415 (0%)
Strand = Plus / Plus
Query: 1 ctgccctgggtgggcctggcatcctgttagctcctggtgtgcagtcccaaaggacagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgccctgggtgggcctggcatcctgttagctcctggtgtgcagtcccaaaggacagggc 260
Query: 61 tgctgcaaaactagatttgggaaccctgtgggagtctaacaccttgtgttagaaactctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgcaaaactagatttgggaaccctgtgggagtctaacaccttgtgttagaaactctg 320
Query: 121 gtgagctagatctgtctgcggggcggggggagggtttaactctcctgtgctgtcttaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagctagatctgtctgcggggcggggggagggtttaactctcctgtgctgtcttaggt 380
Query: 181 cggtcaaaggcttgcatctgtgacctacatttcagcctccacggacacacagaccacgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggtcaaaggcttgcatctgtgacctacatttcagcctccacggacacacagaccacgtg 440
Query: 241 gccggccagacccacgagccacattcctgtgcagagacagggagtgggtgctgcaggggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 441 gccggccagacccacgagccacattcctgtgcagagacagggagtgggtgctgc-gggag 499
Query: 301 tgggggggggcacggaatcagtatcacacctcccacttcctgcaccccaggcatctgcat 360
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 -gggggggggcacggagtcagtatcacacctcccacttcctgcaccccaggcatctgcat 558
Query: 361 gtgaacccaggcagctcgcccactcaccacttcccctgaggccctactggatgct 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtgaacccaggcagctcgcccactcaccacttcccctgaggccctactggatgct 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 813
Length adjustment: 9
Effective length of query: 406
Effective length of database: 804
Effective search space: 326424
Effective search space used: 326424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
