XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACGA
AGGTGCGTAAGTGGGAATTGTAAACGTAGCAACAGGCAGGCCAGATTCAA
GGTGTGGAGGAATAGAAAACGACATGTAAGTGAAGGGACATTAGGAAACA
GTCAGTGCACTGTGACACTTGGCAATAATCTCCCGGACACAGCAATGTCA
CCACAGCTGCCAAGACTGAGTGACTTCTCATCTGACACACTGGTTCCATG
TTTATGACTTTGCTATGACATATAATCCACCTTTGAGTTTTTCAGTATGT
AGTGTTTTACTGCAATTTATTTTTAACCTGTTTCCAATGTATGAGAGAAA
TAATTTCTTTAATGTATATCCATATATATATTAATGTCCAGTCTATGCTG
AATGCTGTGAGTCCTGGAGAATTTTATCTAAATTATATTCCCTAAGGATT
CCTAGTACAGTTTATGATTAAAACAAGAGATATTTATTCACCTACCTCCA
ATCATTTTTTTAATTTCTGTTTCTTGGGAACAATTCTATGTAAAGAATAG
GTAGTTTGGTGTTTGAGGGCCATATGTTATCTCCCACCTGCTCATTTAAC
ATGGAACTAGCTATAACCCCTGAGCAAATAAGTAACTATAGGTGTGGATA
TATTAATGAAAGATTAAATTCTGAATTTATATAAAGGCCATGCCCCAAAA
AAAATTGGTAGGAATTATTTTCCAAAAATGN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTGTTTAGCTCTGTACCCCATTTTAAATAGGATT
ATTTGGTTCTCTGGAGTCTAAGTACTTGAGTTCTTTGTATATATTTGATA
TTAGTCATGTATCAGATGTAGTATTGGTAAAGATATTTTCCCAATCTGTT
GGTTGCCATTTTGTCCTATTGTTAGTGTCCTTTACCTTACAGAAGCTTTG
CATTTTATGAGGTACCATTTGTCAATTCTTTGTTTTAGACCATAAGCCAT
TAGTGTTCTCTTCAGGAACTTTTCCCCTGTGCCCATGTATTCCAGGCTTT
TCCCCACTTTCTCTTCTATTGGATTCAGTGTATCTTGTTTTACGTGGAGG
TCCTTGATTCATTTGGACGTGTCCTTTGTACAGGGAGATATAATGGATCA
CTTCTATATCTTGACCACCAGTTGAACCAGCACCTTTTGTTGAAAATCCT
GTCCTTATTCCATTGGATGGTTTTAGCTCCTTTGTCAAAGGTCAAGTGAC
TATAGGTGTGTGGGTTCATTTATGGGTCTTCAATCTATTCCATTGATCTA
CCTGCCTGTCACTGTACCATTAACATATAATTTTTATCACTGTTGCTCTG
TTGTAAAACTTGAGATCAGGGATGGTGATTCCCCTGAAATTCTTTTTATT
GTTGAAAAAAGTTT

Query= MSMg01no358_h12.b1 MSMg01no358_h12.b1 CHROMAT_FILE:
MSMg01no358_h12.b1 PHD_FILE: MSMg01no358_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:44 2005
         (482 letters)



>mm_chr5_47315935_47316816
          Length = 882

 Score =  890 bits (460), Expect = 0.0
 Identities = 472/476 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacgaaggtgcgtaagtgggaattgtaaacgtagcaacaggcaggccagattcaa 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgaaggtgcataagtgggaattgtaaacgtagcaacaggcaggccagattcaa 264

                                                                       
Query: 65  ggtgtggaggaatagaaaacgacatgtaagtgaagggacattaggaaacagtcagtgcac 124
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 ggtgtggaggaatagaaaacgacatgtaagtgaagggacattaggaaacaatcagtgcac 324

                                                                       
Query: 125 tgtgacacttggcaataatctcccggacacagcaatgtcaccacagctgccaagactgag 184
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgacacttggcaataatctcccggatacagcaatgtcaccacagctgccaagactgag 384

                                                                       
Query: 185 tgacttctcatctgacacactggttccatgtttatgactttgctatgacatataatccac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgacttctcatctgacacactggttccatgtttatgactttgctatgacatataatccac 444

                                                                       
Query: 245 ctttgagtttttcagtatgtagtgttttactgcaatttatttttaacctgtttccaatgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctttgagtttttcagtatgtagtgttttactgcaatttatttttaacctgtttccaatgt 504

                                                                       
Query: 305 atgagagaaataatttctttaatgtatatccatatatatattaatgtccagtctatgctg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgagagaaataatttctttaatgtatatccatatatatattaatgtccagtctatgctg 564

                                                                       
Query: 365 aatgctgtgagtcctggagaattttatctaaattatattccctaaggattcctagtacag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatgctgtgagtcctggagaattttatctaaattatattccctaaggattcctagtacag 624

                                                                   
Query: 425 tttatgattaaaacaagagatatttattcacctacctccaatcatttttttaattt 480
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 625 tttatgattaaaacaagagatatttattcacctacctccaatcattttttaaattt 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)