Query= MSMg01no359_d21.b1 MSMg01no359_d21.b1 CHROMAT_FILE:
MSMg01no359_d21.b1 PHD_FILE: MSMg01no359_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:42 2005
(424 letters)
>mm_chr5_40890707_40891530
Length = 824
Score = 768 bits (397), Expect = 0.0
Identities = 415/421 (98%)
Strand = Plus / Minus
Query: 4 ggaattcagtgtgattttgtgtaagttctcaactaaggctttataaacccagtcaataat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggaattcagtgtgattttgtgtaagttctcaactaaggctttataaacccagtcaataat 565
Query: 64 tctcagcttcacttggaggtttgcttgttgagtgtaggagatattacaaagcaggtagaa 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctcagcttcccttggaggtttgcttgttgagtgtaggagatattacaaagcaggtagaa 505
Query: 124 aatgctggcttatatggatagtataagctccgttcaaagaacacaccgacttgagacagt 183
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 504 aatgctggcttatatggatagtataagctccgttcaaagaatacactgacttgagacagt 445
Query: 184 ctgctgcttttgggagactggggtgattggctgtgataatggcagacactgagtgagaag 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgctgcttttgggagactggggtgattggctgtgataatggcagacactgagtgagaag 385
Query: 244 tataaccctgtctacaaagctgaacatagactgttcatgggtttagtagccacccaagac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tataaccctgtctacaaagctgaacatagactgttcatgggtttagtagccacccaagac 325
Query: 304 ttggctttatctacatagtgaaaggtgtcaaacatctctgtaatataatgacaatgacaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttggctttatctacatagtgaaaggtgtcaaacatctctgtaatataatgacaatgacaa 265
Query: 364 taattataacaataacagtttggtatactttaggctttgtatactgcctaattcaattag 423
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 264 taattataacaataacagtttgatatactttaggctttgtataccgcctaattcaattag 205
Query: 424 c 424
|
Sbjct: 204 c 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_d21.g1 MSMg01no359_d21.g1 CHROMAT_FILE:
MSMg01no359_d21.g1 PHD_FILE: MSMg01no359_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:42 2005
(407 letters)
>mm_chr5_40756602_40757408
Length = 807
Score = 746 bits (386), Expect = 0.0
Identities = 403/411 (98%), Gaps = 5/411 (1%)
Strand = Plus / Plus
Query: 1 taaagactggctgagatttccagacatgtgggctgaaaaaccactggattcatgacctct 60
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 201 taaagactggctgagatttccagacatgtggtctgaacaaccactggattcatgacctct 260
Query: 61 ccattgatagagagccactgttggtctagcaggatcacaacctgcaagtctttttaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattgatagagagccactgttggtctagcaggatcacaacctgcaagtctttttaataa 320
Query: 121 atgccctacacacacagacacacagacacacacacactcgtgtgcatatatagattatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgccctacacacacagacacacagacacacacacactcgtgtgcatatatagattatat 380
Query: 181 atgttatatatttacatatgaaatatgtacttatatatgatatataaaattctcaaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgttatatatttacatatgaaatatgtacttatatatgatatataaaattctcaaatgc 440
Query: 241 ataaataaaataaacttatctgtactattatacagtaattctaaatagcaataaact--- 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaataaaataaacttatctgtactattatacagtaattctaaatagcaataaactgtt 500
Query: 298 -atttataatagcaaaaaaacaaactataaatatttaacacctagaaatcctaaatatag 356
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttataatagcaaaaaa-caaactataaatatttaacacctagaaatcctaaatatag 559
Query: 357 ggggaggnggctatttttctatttaagttacacattatacaatggatacat 407
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggggaggtggctatttttctatttaagttacacattatacaatggatacat 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
