TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCATTCCTGAGCCCCATTTTTAATGGGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATCAGACTGATTTTTGATGACACCAAGGACTATGAGCT
TAAGGCTGCTACTAGTAGTCCCAAATCAATTACCAATCAAGAAAATACAC
AATACACTTTCCTCAAAACCAATCTGATGGAGGCATTCTCTCAATTGAGG
ATCCCTCTTCCAACGTGAATTTAGCTTGTGTCGAACTGACAAAAAAGTAG
CTCTGAGATCACATTTTTTAAAATTTTATTGGTTATTTTATTTATTTATA
TTTCAAATGTTATCCCCCTTCTTGGTTTCCCCTTTGCAAACCTCCTATGC
AATCCCCTTTCCCCTGCTTCTATGAGGGTGCTCCCACATACACCCACTCC
CATCTCACAGCCCTAACATTCCCATATTCTGAGGCATCAAGCATTCACAG
GACCAAGGGCCTCCCCTCTCATTGATGCCAGATAAGGCCATCCTCTGCTA
CATATACCACTGGAGTCATGGATTCCTCCATGTGTACTTTTTGGTTGGGG
GGTTAGGCCCCAAGAACCCTGGAAAGGCTGGGTGGGTGAAAACCATTGTT
CTTCCAAAAGGGAGGCGAACCCTTCCGGTCCCTTCGGTCTTCCCTTAATC
CTCCCTTGGGGGGTG

CAATATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTTCCATTTTCTAAGCCTCAGGATTT
TCATTTGTTAAATTAGTTTATTCAACTCAATTAATGGCATAAACTCTAGT
GACTCTAATATTTCATGAGTCTGCACTGCCCTGGATAGCATCCTGGCAGA
CTGGCACTTTCACTTTCAGATCCACAGTACATATGCATGGGAAACCCTAG
CATACTCACCAAACTCTCAAAAGGGGTAGACCAGATCTCCTGGTTGGCAT
GGAGCCATCTTCCAGGAGAGTCTTTGAAATATTGACAGCCAAATTGGATC
AAGGCCCAGATTTAAAAGAAATCAAAAGCCTAGCCTTAAATAAAAACCAG
CTGGAAATACAACTATTAAAAAAGATGGGGGGGGGATGGAGCAAATCCTG
TAGGCTTGGACCTTATTGCACATGTAAAACACAAACACTAGCAGCCAAGA
TGCAGACTTTCTGTAGTCTTAATAGGAGAATTTGTGCAATCATCTTGATT
TGTGTAATGAGACCCCGCTGNTTCAACATGTTTAGGCTCTTTACCATGAG
AAAGAAAAGGGGATTTTATCTTGTGGTTGACAAAACTGGGGATGGTTTTT
TCTGATAGAATTGGAAAAGGAATTGGGAAATTCCCTTCCCCCCCCGATTT
AAGGTTTTTGTCAACCTTCCTGGCTTTAAACATTGCCGGTTTTTCCCAAA
GGGCAACCTTTTAAAAAATTTTTCN

Query= MSMg01no360_j22.g1 MSMg01no360_j22.g1 CHROMAT_FILE:
MSMg01no360_j22.g1 PHD_FILE: MSMg01no360_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:25 2005
         (416 letters)



>mm_chr5_39517222_39518042
          Length = 821

 Score =  760 bits (393), Expect = 0.0
 Identities = 412/421 (97%), Gaps = 5/421 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttccattttctaagcctcaggattttcatttgttaaattagtttattcaactcaatta 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttccattttctaagcctcaggactttcatttgttaaattagtttattcaactcaatta 260

                                                                       
Query: 61  atggcataaactctagtgactctaatatttcatgagtctgcactgccctggatagcatcc 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggtataaactctagtgactctaatatttcatgagtctgcactgccctggatagcatcc 320

                                                                       
Query: 121 tggcagactggcactttcactttcagatccacagtacatatgcatgggaaaccctagcat 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcagactggaactttcactttcagatccacagtacatatgcatgggaaaccctagcat 380

                                                                       
Query: 181 actcaccaaactctcaaaaggggtagaccagatctcctggttggcatggagccatcttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actcaccaaactctcaaaaggggtagaccagatctcctggttggcatggagccatcttcc 440

                                                                       
Query: 241 aggagagtctttgaaatattgacagccaaattggatcaaggcccagatttaaaagaaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggagagtctttgaaatattgacagccaaattggatcaaggcccagatttaaaagaaatc 500

                                                                       
Query: 301 aaaagcctagccttaaataaaaaccagctggaaatacaactattaaaaaagatgggg--- 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 501 aaaagcctagccttaaataaaaaccagctggaaatacaactattaaaaaagatggggcgg 560

                                                                       
Query: 358 --gggggatggagcaaatcctgtaggcttggaccttattgcacatgtaaaacacaaacac 415
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggggggtggagcaaatcctgtaggcttggaccttattgcacatgtaaaacacaaacac 620

            
Query: 416 t 416
           |
Sbjct: 621 t 621


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 821
Length adjustment: 9
Effective length of query: 407
Effective length of database: 812
Effective search space:   330484
Effective search space used:   330484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)