Query= MSMg01no361_d12.b1 MSMg01no361_d12.b1 CHROMAT_FILE:
MSMg01no361_d12.b1 PHD_FILE: MSMg01no361_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:11 2005
(507 letters)
>mm_chr5_123146611_123147517
Length = 907
Score = 944 bits (488), Expect = 0.0
Identities = 500/504 (99%)
Strand = Plus / Plus
Query: 4 ggaattcatgggagggaaaaaccagaaaaaggaagcagctatggagagcttggaaatgct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatgggagggaaaaaccagaaaaaggaagcagctatggagagcttggaaatgct 263
Query: 64 gctgtgcacaaacacctcccgatgaccttcataatcgaacatcatgcatttcctgtatct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gctgtgcacaaacacctcccgatgaccttcataatcgaacatcatgcatttcctgtatct 323
Query: 124 tagtacagtccgcacactgcagttgtacaaatactcaggtgttgagtgtcctctgcctct 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagtacagtctgcacactgcagttgtacaaatactcaggtgttgagtgtcctctgcctct 383
Query: 184 tcagtgactacattcagaagtggggaaagagttggatgaacctggatgggcgcctaaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagtgactacattcagaagtggggaaagagttggatgaacctggatgggcgcctaaaat 443
Query: 244 ttcagcactcgaaaggctaagatgggagacccgttgggagctcgtggctagcgtgagata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcagcactcgaaaggctaagatgggagacccgttgggagctcgtggctagcgtgagata 503
Query: 304 catagtggttttttatttatttgtttatgtactatatactgcagttttgtggttttattt 363
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 504 catagtggttttttatttatttgtttatgtactaaatactgcagttttgtggttttattt 563
Query: 364 aaacacaaaacatgcatgccacccacctactcatttcttcttcaatccgcagcctggtgt 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 564 aaacacaaaacatgcatgccacccacctactcattacttcttcaatccgcagcctggtgt 623
Query: 424 tgggattggtgaccctgatggccagctgtgttgctctttgtatgatggtttttggttctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgggattggtgaccctgatggccagctgtgttgctctttgtatgatggtttttggttctt 683
Query: 484 agaggaaggaagcaccgtgagcaa 507
||||||||| ||||||||||||||
Sbjct: 684 agaggaagggagcaccgtgagcaa 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_d12.g1 MSMg01no361_d12.g1 CHROMAT_FILE:
MSMg01no361_d12.g1 PHD_FILE: MSMg01no361_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:11 2005
(372 letters)
>mm_chr5_123342258_123343028
Length = 771
Score = 613 bits (317), Expect = e-180
Identities = 323/325 (99%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 47 ctcatagtgacacctttccttttatttatttgtttgtttgtttaatgtaagtatactgta 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctcatagtgacacctttccttttatttatttgtttgtttgtttaatgtaagtatactgta 712
Query: 107 gtgtgtcttcagacactccagaagagagcatcagatttcgttacagatggttgtgagcca 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gtgtgtcttcagacactccagaagagagcatcagatttcgttacagatggttgtgagcca 652
Query: 167 ccatgtggttgctgggatttgaactcaggacctctggaagagcagtcggcattcttaacc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ccatgtggttgctgggatttgaactcaggacctctggaagagcagtcggcattcttaacc 592
Query: 227 actgagccatctcaccagcctgacacctttccttttaagggagtagcttttgaattggtc 286
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 591 actgagccatctcaccagcccgacacctttccttttaagggagtagcttttgaattggtc 532
Query: 287 ctggggaaagaacctttgaagtatatgtgtttcatgttttaataactgttttttttgttt 346
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 531 ctggggaaagaacctttgaagtatatgtgtttcatgttttaataactg-tttttttgttt 473
Query: 347 gtttgtttggtttggggtgttttgt 371
|||||||||||||||||||||||||
Sbjct: 472 gtttgtttggtttggggtgttttgt 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
