Query= MSMg01no361_e17.b1 MSMg01no361_e17.b1 CHROMAT_FILE:
MSMg01no361_e17.b1 PHD_FILE: MSMg01no361_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:17 2005
(521 letters)
>mm_chr5_132874455_132875376
Length = 922
Score = 634 bits (328), Expect = 0.0
Identities = 370/386 (95%), Gaps = 7/386 (1%)
Strand = Plus / Minus
Query: 1 aaggaagtgggtactcctgccccactgaggctaagatggcatgcaacatggttactacat 60
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 469 aaggaagtgggtattcctgccccactgaggctaagatggcatgaaacatggttactacat 410
Query: 61 catctatgcaggcatctaggatggcatcctggggatacccacctgattttgtagcatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 catctatgcaggcatctaggatggcatcctggggatacccacctgattttgtagcatagc 350
Query: 121 ccagtgaaaagaagccaccttcaccaaaatctcagtatttccactaagcatggagcatga 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 349 ccagtgaaaagaagccaccttcaccaaaatctcagtatttcccctaagcatggagcatga 290
Query: 181 gttctgagaaggatcttaccaaacatttttt-cttctaccatttagttgctgaagttaag 239
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 289 gttctgagaaagatcttaccaaacatttttttcttctaccatttagttgctgaagttaag 230
Query: 240 atataaagctctttcatgtggcggcggcggctgctgctgctgctgctgcttctgcttctc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atataaagctctttcatgtggcggcggcggctgctgctgctgctgctgcttctgcttctc 170
Query: 300 cttctccttctcctcttcctcctcttcttccttct----cctcttcctcctcttcttcct 355
||||||||||||||||||||||||||| ||| || ||||||| ||||| |||||||
Sbjct: 169 cttctccttctcctcttcctcctcttccccct-cttccccctcttcttcctcctcttcct 111
Query: 356 cctcctcttcctccttctccttcttc 381
||||||||||||||| ||| ||||||
Sbjct: 110 cctcctcttcctcctcctc-ttcttc 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space: 466032
Effective search space used: 466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_e17.g1 MSMg01no361_e17.g1 CHROMAT_FILE:
MSMg01no361_e17.g1 PHD_FILE: MSMg01no361_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:18 2005
(475 letters)
>mm_chr5_132702427_132703301
Length = 875
Score = 880 bits (455), Expect = 0.0
Identities = 464/467 (99%)
Strand = Plus / Plus
Query: 9 tgcagaaatacattagaggtgttgtgctgacttcccactaggaaatatctctttaccagt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tgcagaaatacattagaggtgttgtgctgacttcccactaggaaatatctctttaccagt 268
Query: 69 tctttcctcactatggtcactctggtgcacacagaggcctctccctgctacttcccaaag 128
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcgttcctcactatggtcactctggtgcacacagaggcctctccctgctacttcccaaag 328
Query: 129 ccactcactaaaggtaggaacaaatagcagagaacaaggcttctttgtggagagaatgga 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ccactcactaaaggtaggaacaaatagcagagaacaaggcttctttgtggagagaatgga 388
Query: 189 tcttcagagtaagatataaaaagggcacagacagggcaaacaggaaggaccttgagtttc 248
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcttcagagtaagatgtgaaaagggcacagacagggcaaacaggaaggaccttgagtttc 448
Query: 249 tcaaatgctggcagatggccccaaatttctctcttgagagtgaaaacacatctgcaggta 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcaaatgctggcagatggccccaaatttctctcttgagagtgaaaacacatctgcaggta 508
Query: 309 gaaagcattgttatttggtaaagaaagcttgaaattgtgttcaggagcaagaagcttgat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaaagcattgttatttggtaaagaaagcttgaaattgtgttcaggagcaagaagcttgat 568
Query: 369 aagtaatgagcttccttttctctttcaccacataccttccaggacccaatctaattgagt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagtaatgagcttccttttctctttcaccacataccttccaggacccaatctaattgagt 628
Query: 429 ccatgaacatcttcaagctatgagattgcaggaactgtggtgtcatt 475
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ccatgaacatcttcaagctatgagattgcaggaactgtggtgtcatt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
