TCCCCTCACCCCTCACACCTCAATCATTTGGGTGCGCGTTATATTCGTAA
TAAACATATTTCCCCAGAAGCGATCTCTGCGCGAATTTCTCCAACCTGTA
CCACACTACTCGTCACTGTGCTGTATTACATCTCCCTGTACCACACATAC
CGCTCTCAATACTTCCCTCTATACTATTCATCGCCAAACATGCTAATATT
CAACATACACACCCCCTCGAAGTATTTCTCACTCCCTCCACTACCCTAGT
TCCAGCATATCGTGTTTATTGAATCCAAATTAATGTCCCAATATAGGGAA
CAATGCTCGGTTGTCTCAGGCCCCACCCAACGGTTTGTCCAAAAACTATG
TCACCACCCTCCCCTCCCCTCTGCCATTGTCTCGCAACTTTGGTCACAAC
CGGGACCTGATACCCACACCCTCTGGTATCAACACTCCTTTTGTTTGGTC
AAATTCCTCCTTTTCTAAATACAATATATGCGTACGCCACCATACACAAA
TCTCCCTCTTAATATCTTATATTTTGCCACTATCTTCTGATCTGTTATCT
CTCACGCTCTCCTCCCCCTCAATATTGATGATCTAATTATGCCTTATCTC
GCCCCTTTTTCTGCACTTCTTTTTAATTCTCTCCACCACCACTATATCAT
ATATAGTCTTGCCTTCCATAATTAACACCCTCCACCACATATATTTTAGC
CTCATCATCCTCTCTCTCCCAATATCAATTCCCGCTCACGGCCAACTACG
TATACTATATCTCCTCCTCCCCACTTCAGACATATTTTTCATACACTACC
TTCACACCTTCACACCCCTACATTATATATTTAACTCAGTTATCCCCTAT
CGCGCCTTCCACCTCATTTTGATTCTGCGATCACCCTCATCTCATCTCTT
CCATTTTGCACACACGCTTCCCTTTATTCACATACCCACTCTATTATATC
CCTACACCCACCACCAACTATATTCTATCTCCTCTACTCGTTATTCTATT
ACAATTCACACATCTATACCTTGCCACACAACTTACTTTCATTCTATACC
TCCCTGTCC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTATAGTTCAAGGGCATCTGCTGTATAATTT
TGTTTAAGAGTCTACAGATCCTTCCTTCAAAACAACCTTCAAGAGGATAA
TCAATGATTCTAATAACCCCCTGCTCTATAAAATGTAAGATATTTCAGAC
AGATTGTATTAGCCTAGCAAAGAAGAGATTAAAGGGGAGAATTCTTACTT
TTTATTAGTAACTCAAGAAAAGATTTGTATAAACTGGTTTAAAATACTCC
ATTTATTTTCAGCAAGCTGGATTTATTATCTAAAACTTTTCAAATATTTA
AGAAGAGTATTTGGAATTGGATATCAAGCACTTATACCAGCAATTTTAAT
ATTAATATTTATCTTTGTTGAAAGCTGTATTTGTATATAACAAACTTTAT
AGAGATTAAAATGACTTATCATGTCTTTTAGGACCTACACTATGTAACCA
AGCCAAGAAAACATTAAGCAGGACTGTGAGTGCCAAAGGGAACTGTGGCT
CAATGAAAATGCTTTTGTTATCTCTACCTCTGGGCTCCCCATGTGATTTA
AAGTACTGAAGTTAATGTTGATATAAATGAAAGACCTGACACACACATCA
ATGCAACAGCACAGACATTCCCAGGATAGACCCACAGAAACATCACCAAC
TGATTTTTGACAAAACTACCGAGACTACTGGAACAAGAAAGATTTATTTT
TCATAAATTGCGTTGACN

Query= MSMg01no362_a09.g1 MSMg01no362_a09.g1 CHROMAT_FILE:
MSMg01no362_a09.g1 PHD_FILE: MSMg01no362_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:14 2005
         (570 letters)



>mm_chr5_47036775_47037745
          Length = 971

 Score = 1036 bits (536), Expect = 0.0
 Identities = 563/572 (98%), Gaps = 3/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatagttcaagggcatctgctgtataattttgtttaagagtctacagatccttccttcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatagttcaagggcatctgctgtataattttgtttaagagtctacagatccttccttcaa 260

                                                                       
Query: 61  aacaaccttcaagag-gataatcaatgattctaataaccccctgctctataaaatgtaag 119
           ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aacaaccttcaagagtg-taatcaatgattctaataaccccctgctctatacaatgtaag 319

                                                                       
Query: 120 atatttcagacagattgtattagcctagcaaagaagagattaaaggggagaattcttact 179
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atatttcagacagattgcattagcctagcaaagaagagattaaaggggagaattcttact 379

                                                                       
Query: 180 ttttattagtaactcaagaaaagatttgtataaactggtttaaaatactccatttatttt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttattagtaactcaagaaaagatttgtataaactggtttaaaatactccatttatttt 439

                                                                       
Query: 240 cagcaagctggatttattatctaaaacttttcaaatatttaagaagagtatttggaattg 299
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caccaagctggatttattatctaaaacttttcaaatatttaagaagagtatttggaattg 499

                                                                       
Query: 300 gatatcaagcacttataccagcaattttaatattaatatttatctttgttgaaagctgta 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatatcaagcacttataccagcaattttaatattaatatttatctttgttgaaagctgta 559

                                                                       
Query: 360 tttgtatataacaaactttatagagattaaaatgacttatcatgtcttttaggacc-tac 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 tttgtatataacaaactttatagagattaaaatgacttatcatgtcttttaggaccctac 619

                                                                       
Query: 419 actatgtaaccaagccaagaaaacattaagcaggactgtgagtgccaaagggaactgtgg 478
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 620 actatgtaaccaagccaagagaacattaagcaggactgtgagtgccaaagggaactgtgg 679

                                                                       
Query: 479 ctcaatgaaaatgcttttgttatctctacctctgggctccccatgtgatttaaagtactg 538
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 ctcaatgaaaatgcttctgttatctctacctctgggctcctcatgtgatttaaagtactg 739

                                           
Query: 539 aagttaatgttgatataaatgaaagacctgac 570
           ||||||||||||||||||||||||||||||||
Sbjct: 740 aagttaatgttgatataaatgaaagacctgac 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space:   538160
Effective search space used:   538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)