NTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAGTTTAATTACGTGGATAAGGGGATGGTCAGTTTATTACTG
GTCATTTTCTTAATTAAAATATGCTGTGCAATGAATAGTGTAATGATTGT
ACCTTGTGAAGAATGCTCCAGAATATTAATGGCCAACAGGTCTTTCTGTT
GAAATACAGAATGGGGTAGAGTCACTGCTGTAATGGTAGTGGGAAAAGAT
TTGGCAGAGTAGGTGACATTCAGTTGTGGAGTTTTAATGATAAAGTTCTG
ATAGACTGGAGAAGGAAAGTCTGGCTAATTCTTAAAATCCAGATTCCAGT
AGTGTCTGTTTGTTTAGATAAATTATAACATTCATTAAAACAAAGGATGG
TCATCAAGCTGAAAATCTAAGCTGAAGTCTGATGGTAGAAAACCTGGAAC
ACCAGATGTAAGAACTTACACTTCATTTAGTCTGTCATATTTAAATGCTA
AGCTGTTTTGATAGAGAGCTAACATTAACCTCCTTGTGTTTGTATGCACA
TGTACAAGAACATCCAGCGTTGTGTACACATGTGTGCATGTGGATGTTTA
CTAACCCCCTTGTAATTTCTTCCATTTTACTTCCCCTCATTTTTGATCAA
GAAACCGTACCCACTATTTGACCCCTTCTCTTTGTCCCGCTTATTTAATT
GCTCCTAATTTTTCCATTTTTTGTCTTTTATTTATCATTCTTGTGAAATT
TTTCCCTTCTCTTATAACTTATAATCCA

CTTCTATTNNAANNAAANNCCCGAGATATGGGTAGCCTGGCGGCGCCTGG
CTTCGAATTTAGGTGAACTATAGAAGATCCCGGAATCTGCTTGAATGAAA
TTAGATTAAAGTTTTGGGGTGTTAAAAGAAGCAAAAATATGTTAAGCCAC
TCATTACTGATTTTGCTAANATTCTAGCTCTCCCTCTGGTATTATCAGGT
GTGTGTGTGTGTGTGTGTGTGTGTNTNNNNNNNNNNNNNNNNNTTNTTNT
TTNTNTTTTTTTTTTTTTTNNNTNTNNNNTTTTTTTTTTTTTTTTTTTTT
TTTTNNTNTTTNNTTTTTTTTTTNNTNNNNNNTTTTTTTTTTTTTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTNTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTNTTTTT
TTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTNNTTTAATTTTTTTTTT
TTTTTGTTTTTTGNNTTTTTNNNNNNNTGTCGGNTTTGTTGTATTTATAN
TNAGTTTNATATTANGNNTGGAATTTGATGAGAGANNTTAAGATTAGNNT
TATGATGTTGNTTGTGAGGTATTTATTTATT

Query= MSMg01no364_g13.b1 MSMg01no364_g13.b1 CHROMAT_FILE:
MSMg01no364_g13.b1 PHD_FILE: MSMg01no364_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:30 2005
         (475 letters)



>mm_chr5_43253883_43254758
          Length = 876

 Score =  866 bits (448), Expect = 0.0
 Identities = 466/472 (98%), Gaps = 1/472 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtttaattacgtggataaggggatggtcagtttattactggtcattttcttaa 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattcagtttaattaagtggataaggggatggtcagtttattactggtcattttcttaa 617

                                                                       
Query: 65  ttaaaatatgctgtgcaatgaatagtgtaatgattgtaccttgtgaagaatgctccagaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttaaaatatgctgtgcaatgaatagtgtaatgattgtaccttgtgaagaatgctccagaa 557

                                                                       
Query: 125 tattaatggccaacaggtctttctgttgaaatacagaatggggtagagtcactgctgtaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tattaatggccaacaggtctttctgttgaaatacagaatggggtagagtcactgctgtaa 497

                                                                       
Query: 185 tggtagtgggaaaagatttggcagagtaggtgacattcagttgtggagttttaatgataa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tggtagtgggaaaagatttggcagagtaggtgacattcagttgtggagttttaatgataa 437

                                                                       
Query: 245 agttctgatagactggagaaggaaagtctggctaattcttaaaatccagatt-ccagtag 303
           |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 436 agttctaatagactggagaaggaaagtctggcaaattcttaaaatccagatttccagtag 377

                                                                       
Query: 304 tgtctgtttgtttagataaattataacattcattaaaacaaaggatggtcatcaagctga 363
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgtctgcttgtttagataaattataacattcattaaaacaaaggatggtcatcaagctga 317

                                                                       
Query: 364 aaatctaagctgaagtctgatggtagaaaacctggaacaccagatgtaagaacttacact 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaatctaagctgaagtctgatggtagaaaacctggaacaccagatgtaagaacttacact 257

                                                               
Query: 424 tcatttagtctgtcatatttaaatgctaagctgttttgatagagagctaaca 475
           |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 256 tcatttagtctgtcatatttaaatgctaagctattttgatagagagctaaca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 876
Length adjustment: 10
Effective length of query: 465
Effective length of database: 866
Effective search space:   402690
Effective search space used:   402690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)